Gene Daro_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0456 
Symbol 
ID3568369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp499097 
End bp500494 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID637678898 
Producthypothetical protein 
Protein accessionYP_283683 
Protein GI71906096 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.259355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTTC TGATCGTGCT GGCGTCGCTG GCTTTCCTGA TGTTCGTGGC CTATCGGGGC 
TACAGCGTCA TTCTTTTTGC GCCGATTGCG GCATTGGGGG CGGTGCTGTT CGTCGATCCC
AACCTGGTCG CACCGATGTT CACCGGCCTT TTCATGGACA AGATGGTCGG CTTCGTGAAG
AACTTCTTCC CGGTCTTCCT GCTCGGGGCG GTGTTCGGCA AGGTGATCGA GCTTTCCGGC
TTCTCAAAAT CGATTGTCGC CGCGGTGATC AAGCTGATCG GTCGCGAGCG GGCCATGCTG
GCCATTGTCG TGGTCTGCGC CTTGCTGACC TACGGCGGTG TCTCGCTCTT CGTGGTCGTC
TTTGCGGTCT ATCCGTTCGC GGCGGAAATG TTCCGCCAGG GCGGGATTCC GAAGCGTCTG
ATCCCCGGCA CCATTGCGCT GGGAGCCTTC ACCTTTACGA TGGATTCGTT GCCCGGTACG
CCGCAAATCC AGAACATCAT CCCGACCACC TTTTTCAAGA CCGATATCTA CGCAGCGCCG
TGGTTGGGGG TGATTGGTGC CGTCTTCATC CTGATCTGCG GCCTGAGCTA TCTGGAATGG
TGTCGTCGCC GTGCGGCTGC CGCCGGTGAA GGCTATGGCG ACGGGCACAG CAACGAGCCG
GAGCCGTTCG AGAATGAAAA GCTGGTCCAT CCGCTGATTG CCATCCTGCC GCTGATCATG
GTTGGCGTGA TGAACAAGGT GTTTACCACG GCGATTCCGG CCCTGTACGG CGAGAAGGTC
TCCTTCATTC CGGCCGTGAT CGGCAAGGCG GCGCCGGTGG TTCAGCAGAC CAAGGCAGTG
GCCGCCATCT GGGCGGTCGA AGGCGCCTTG TTGATCGGTA TTGCGACGGT TTTCGTGTTT
GGCTGGAAAA TGGTGTTCAG CAAGTTCGGT GAAGGCAGCA AGAGCGCCAT CGGCGGTGCC
CTGCTGGCGA CGATGAATAC CGCTTCCGAA TACGGCTTTG GTGCCGTGAT CGCTGCTCTG
CCCGGTTTTC TGGTCGTGGC CAATGCTTTG TCGGCGATTC CCAATCCGCT GGTCAATGAG
GCGATCACCG TGACCGCGCT GGCCGGCATT ACCGGCTCGG CTTCCGGCGG CATGGGCATT
GCGCTGGCGG CGATGGCCGA AACCTTCATT GCCAACGCGC AGGCGGCCGG CATCCCGCTC
GAAGTCTTCC ACCGGGTGGC CTCGATGGCG TCCGGCGGCA TGGACACGCT GCCGCACAAT
GGTGCGGTGA TCACGCTGTT GGCGGTGACG GGCCTGACCC ATCGTCAGTC GTACAAGGAC
ATCTTTGCCA TTACCTGCAT CAAGACGGCT GCCGTCTTCG TGGTGATCGC GGTCTTCTAC
GCCACTGGTA TCGTTTAA
 
Protein sequence
MDFLIVLASL AFLMFVAYRG YSVILFAPIA ALGAVLFVDP NLVAPMFTGL FMDKMVGFVK 
NFFPVFLLGA VFGKVIELSG FSKSIVAAVI KLIGRERAML AIVVVCALLT YGGVSLFVVV
FAVYPFAAEM FRQGGIPKRL IPGTIALGAF TFTMDSLPGT PQIQNIIPTT FFKTDIYAAP
WLGVIGAVFI LICGLSYLEW CRRRAAAAGE GYGDGHSNEP EPFENEKLVH PLIAILPLIM
VGVMNKVFTT AIPALYGEKV SFIPAVIGKA APVVQQTKAV AAIWAVEGAL LIGIATVFVF
GWKMVFSKFG EGSKSAIGGA LLATMNTASE YGFGAVIAAL PGFLVVANAL SAIPNPLVNE
AITVTALAGI TGSASGGMGI ALAAMAETFI ANAQAAGIPL EVFHRVASMA SGGMDTLPHN
GAVITLLAVT GLTHRQSYKD IFAITCIKTA AVFVVIAVFY ATGIV