Gene Daro_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0445 
Symbol 
ID3568357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp488997 
End bp489596 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID637678886 
Productputative denitrification protein NorE 
Protein accessionYP_283672 
Protein GI71906085 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0000224014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.5524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCACCATCGA CGAACCCCCC CCGCCGGAAG ACAGCACCCG CCGCATTCCC 
GGCAACAAGG GGATGTGGGC CGGCATTACC TGCGAGTTTG TCGAGTTCAC CGTGCTCTTC
GCGGTCTATT TCATAGCCCG CGCCCATTTT CCCGATGCCT TTCACGCCGG GGCACAAAAG
CTCTCAGTCA TTTCCGGCAC GACCATCACC CTGTTGATGA TCACCAGCAG CTACTTCATT
GCCTGCTCGC TCAACGCCAT CCGTCAGGAC AAGCATCGCG CCGCCGTCAT CTGGCTGGTC
GTCGGGCTGA TCATCGCCCT CGGTTACCCG CTGACCAAGG CGCTGGAAAT CAACTGGAAC
CTGGCGCACG GCATCAACGG CGAATCAGGC ATCTTCTTCA CTGTCTATTA CTACCTGACC
TTCACCCATC TGGTGCATGC CACCTGGGGC ATCCTTGGCA TCCTGTGGGT GCTGGCCCGA
CTGCTATTCC ACGGCTATTC ATCCAGGGAC TACGCCGGCC TGGAGGCACT GGCCTGTTAC
TGGCACGCCA CCGACATCAT CTGGCTGGTC ATCTTCCCGC TGTTCTACGT GCTGGCCTGA
 
Protein sequence
MTAVTIDEPP PPEDSTRRIP GNKGMWAGIT CEFVEFTVLF AVYFIARAHF PDAFHAGAQK 
LSVISGTTIT LLMITSSYFI ACSLNAIRQD KHRAAVIWLV VGLIIALGYP LTKALEINWN
LAHGINGESG IFFTVYYYLT FTHLVHATWG ILGILWVLAR LLFHGYSSRD YAGLEALACY
WHATDIIWLV IFPLFYVLA