Gene Daro_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0430 
Symbol 
ID3567676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp473565 
End bp475070 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content59% 
IMG OID637678870 
Productsensor histidine kinase 
Protein accessionYP_283657 
Protein GI71906070 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00032493 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAGCGCCC CCCTGGCGAG TAATTCTCCG ACGCCACCAT CCGAGACCGA GCGCTCGCTG 
TTTGGCGAGA TCCTCGACTG GATGCTGGCG CCCCTGCTTT TTGTCTGGCC GTTGAGTATT
GCCTTCACGC ATTACTTTGC CAACAACGTC GCCAATTATC CTTATGACCA GGCCTTGCGT
GAGCATGTGG CGGCGATCGC CCGCCAAGTC AAACTGGTCA ATGGCAAGCC ACAACTCTCC
TTGCCGGCAT CAGCTCGTGC CTTGCTGCGA GCCGACGAAA CGGACAGCGT GTATTTCCAT
GTGGTGACTT TTGACGGGCG TTTTCTGGCT GGTGACAAGG AGTTGCCGTT GAGCCAACTG
CCACTGGACG ACGCCATGGT TTCCGGCGAA ATCTATCAGC GAGACGCTGA TTTCAAGGGG
CAGGATCTTC GAATGGCTTA TACCTATCTG GCTGAGCCGA ACATGCCGAA GTCGCAGTGG
GTGGTCATCG AGGTTGGCGA AACCACGGAA AAGCGCAGTC AACTGGCCAA CAAGATTGTT
GCCAGCGTTA TCCTGCCGCA ATTCATCATT ATTCCGCTGG CGGTCATGCT CGTCTGGTTC
GGCTTGTCTC GCGGTTTGCG GCCCCTGACT CGTCTGCGCC AGACGATCGA TGCCCGTCAG
CCGGACGATT TGTCGCCAAT CGCCACACGG CGGGTGCCTG AAGAGCTTGA GCCGCTGGTC
GAAGCCTTCA ACGAAATGCT CGAACGAATG AAGCGCAGTG TCGAGGCGCA GCAGCGTTTT
GTCGCCGATG CGGCCCATCA GCTACGGACG CCGCTGACCG GATTGAAGAC ACAGGCCCAG
TTTGCCATTC GTGAAACTGA TCCCGAGGCA TTACGTCACG CCCTGCGCCA GATAGCGACC
GGGGTGGATC GTGCCGGCCG CTTGGTGAAT CAACTGCTGA CGCTGGCCCG TACCGAAGGC
GGCGAGTTGG CGCAGCGCCG CCATGAACCG CTCGATCTTT CCCTTCTGGT GCGCGAGGTG
GTTGAAGACT GGGTGACCGT TGCCATCGAG AAAGATATCG ATCTCGGCTA CGAGTCGGAA
GGTCCGGCAA TGATCAGCGG CAACTCCTTC CTGCTTCGTG AATTGGCCAA GAATCTTATC
GACAATGCCT TGCGTTATAC GCCGGCCGGC GGTCGCGTGA CCTGTCGGGT TGTGGTTAAC
CCCGACACGG TGCTGTTGGA GGTTGAAGAT AACGGCGTCG GTATCAGCGA GGAGCAGGCT
GATCTGGTTT TCGAACGCTT CTATCGCGTT GATGACGCAT CGACCGAGGG CAGTGGTCTT
GGCCTGGCCA TCGTTCAGGA AATTGCCATG CAGCACGATT CGCGCGCCAG CCTGCGTCCA
AATCCACTAG GCAAGGGGGC AATTGCCCGC ATTGCCTTTG CGGCTTGGTC TCCGCCACCG
TTGCCACCGC CGCCGCCAGA TGATTTCTCC GAGCTTTATC GTCAGTCGCC ACCTATTGGC
ACCTGA
 
Protein sequence
MSAPLASNSP TPPSETERSL FGEILDWMLA PLLFVWPLSI AFTHYFANNV ANYPYDQALR 
EHVAAIARQV KLVNGKPQLS LPASARALLR ADETDSVYFH VVTFDGRFLA GDKELPLSQL
PLDDAMVSGE IYQRDADFKG QDLRMAYTYL AEPNMPKSQW VVIEVGETTE KRSQLANKIV
ASVILPQFII IPLAVMLVWF GLSRGLRPLT RLRQTIDARQ PDDLSPIATR RVPEELEPLV
EAFNEMLERM KRSVEAQQRF VADAAHQLRT PLTGLKTQAQ FAIRETDPEA LRHALRQIAT
GVDRAGRLVN QLLTLARTEG GELAQRRHEP LDLSLLVREV VEDWVTVAIE KDIDLGYESE
GPAMISGNSF LLRELAKNLI DNALRYTPAG GRVTCRVVVN PDTVLLEVED NGVGISEEQA
DLVFERFYRV DDASTEGSGL GLAIVQEIAM QHDSRASLRP NPLGKGAIAR IAFAAWSPPP
LPPPPPDDFS ELYRQSPPIG T