Gene Daro_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0429 
Symbol 
ID3567675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp472916 
End bp473587 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID637678869 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_283656 
Protein GI71906069 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.199286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000258733 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCATCC TTATCGCTGA AGACGACGCC ATCATCGCGG ATGGCTTATC CCGCTCCCTA 
CGGCAGGGCG GTTACGCTGT GGACTGGGCA CCCAATGGCA TGGAGGCCGA CACGGCACTG
GTCACGGTAT CCTACGATTT GCTGATTCTT GATCTCGGTT TGCCCAAGCT TTCCGGGCTT
GAGGTGCTCA AGCGACTACG GGCGCGTAAT TCGCAGTTGC CGGTGTTGAT TCTGACGGCC
CTTGATGGCA CAGGCGATCG CGTCAAGGGG CTTGACCTGG GTGCGGACGA CTACATGGTC
AAGCCGTTTG AGCTGCCTGA GCTTGAAGCC AGGGTGCGGG CCTTGACCCG CCGCTCGGCT
GGTACCTCGC CGACCATCCA GTGTGGCGCC CTGACTTATG ACCAGGTTGG ACGAGTCGCT
CAGATACAGG GCCAAACCCT GGAGTTGTCG GCGCGTGAAG TTGGCTTGCT GGAAGTGCTG
TTGAGCCGGA TGGGGCGCTT GGTCAGCAAG GACCAGCTGG TCGATCATCT TTGTGGCTGG
GGTGAGGAAG TCAGCCATAA TGCCATCGAG GTTTATGTCC ATCGCCTGCG CAAGAAGATC
GAGCCGGGCG GCGTGAAGAT CGCGACCGTT CGTGGTCTGG GTTATTGCCT TGAGCGCCCC
CCTGGCGAGT AA
 
Protein sequence
MRILIAEDDA IIADGLSRSL RQGGYAVDWA PNGMEADTAL VTVSYDLLIL DLGLPKLSGL 
EVLKRLRARN SQLPVLILTA LDGTGDRVKG LDLGADDYMV KPFELPELEA RVRALTRRSA
GTSPTIQCGA LTYDQVGRVA QIQGQTLELS AREVGLLEVL LSRMGRLVSK DQLVDHLCGW
GEEVSHNAIE VYVHRLRKKI EPGGVKIATV RGLGYCLERP PGE