| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0428 |
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| Symbol | |
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| ID | 3567674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 470912 |
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| End bp | 472591 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637678868 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_283655 |
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| Protein GI | 71906068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.00400759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000917486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTAAAT TCACCAAAAT TCTTGCTGGC CTTCTGGCCA TGGCGGTTGC CGGTGGCGCC
ATCGCCGCCG GTGCCGACCT TGGCAACACC ACCCAGCAGG CAACCAACTG GATCGCAATT
TCCATGTTTG CGGTCTTCGT CGGCGGCACG CTTTTCATCA CCAAGTGGGC GGCCTCCAAG
ACCAAGTCCG CTGCTGACTT CTACACCGGC GGTGGTGGCA TCACCGGCTT CCAGAACGGC
TTGGCGATTG CTGGCGACTA CATGTCCGCT GCTTCCTTCT TGGGTATTTC CGGTCTGGTG
TTCGCCAACG GCTTCGACGG CCTGATCTTC TCGATCGGCT GGCTGGTCGG CTGGCCGGTC
ATCACCTTCC TGATGGCCGA GCGTCTGCGT AACCTGGGCA AGTTCACGTT CGCCGACGTG
GCTTCCTACC GTTTCGCCCA GACCCCGGTT CGCGTTTTTG CAGCTTCCGC TTCCCTGGTT
ATCGTCGCCT TCTACATGAT TGCGCAGATG GTCGGTGCCG GTCAGCTGAT CAAGGTGCTC
TTCGGTCTGG AGTACATGTA CGCCGAAATC CTCGTCGGTT CCGTGATGAT GATGTACGTG
CTGTTCGGTG GCATGACCGC CACGACCTGG GTGCAGATCA TCAAGGCCTG CATGCTGCTG
GCTGGTGCCA CCTTCATGGC CGTCTCCGTA CTCCTGCAGT TCGGTTTCTC GCCGGAAGCT
TTGTTCACCA AGGCGGTTGA AGTTCACTCC AAGCACGACG CCATCATGGC TCCGGGCGCA
CTGATCAAGG ATCCGATCTC TGCCATCTCC GTTGGTATGG CGCTGATGTT TGGTACCGCT
GGTCTGCCGC ACATCCTGAT GCGCTTCTTC ACCGTGCCGA ACGCCAAGGA AGCCCGCAAG
TCGGTTGCCT GGGCAACCAC CTGGATCGGT TACTTCTACA TCCTGACCTT TATCATCGGT
TTCGGCGCCA TTACCAATCT GGTGCAAAAC CCGGGCGACT TCTATGTCGG CGGCGAAATC
GCCAAGGGCT TGAAGGGCGG CGGCAATATG GCTGCTGTGC ATTTGGCCAA GGCGGTTGGT
GGTGACGTGT TCCTCGGCTT CATCTCTGCC GTGGCCTTCG CAACCATCCT GGCTGTTGTG
GCGGGTCTGA CCCTGTCTGG CGCTTCTGCC GTGTCCCATG ACCTGTACGC TTCCGTGTTC
AACAAGGGTT GCTCTTCCGA ACAGGAGCTG CGTGTCTCCA AGATCACGAC CGTGCTGCTC
GGCATCCTGG CTGTTGTTCT GGGTATCGCC TTCGAGAAGG AAAACGTTGC CTACATGGTG
ATGCTGGCCT TCGTGATCGC CTGTTCCTCC AACTTCCCGG TGTTGTTCAT GTCCGTGCTG
TGGAAAAACT GCACGACCAA GGGGGCCGTG GTTGGTGGCT TCGTCGGTCT GGCCTCTGCC
GTGGTCCTGA CCATCGGTTC CGCCAGCGTC TGGGAAGCCG TGATGCACAA TCCGAAGGGC
TCCGCCTGGT TCCCGTACAA CTCTGCTGCC ATCTTCTCGA TGACCGCTGC GTTCGTGACC
ATCTGGCTGG TGTCCATTCT GGACAACTCC GCACAGGCCA AGAAGGAGCG TGCTCTGTAC
CCGTCTCAGC AACTGCGCTC CGAGACTGGT CTGGGTGCCT CGACTGCTTC TTCGCACTAA
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| Protein sequence | MTKFTKILAG LLAMAVAGGA IAAGADLGNT TQQATNWIAI SMFAVFVGGT LFITKWAASK
TKSAADFYTG GGGITGFQNG LAIAGDYMSA ASFLGISGLV FANGFDGLIF SIGWLVGWPV
ITFLMAERLR NLGKFTFADV ASYRFAQTPV RVFAASASLV IVAFYMIAQM VGAGQLIKVL
FGLEYMYAEI LVGSVMMMYV LFGGMTATTW VQIIKACMLL AGATFMAVSV LLQFGFSPEA
LFTKAVEVHS KHDAIMAPGA LIKDPISAIS VGMALMFGTA GLPHILMRFF TVPNAKEARK
SVAWATTWIG YFYILTFIIG FGAITNLVQN PGDFYVGGEI AKGLKGGGNM AAVHLAKAVG
GDVFLGFISA VAFATILAVV AGLTLSGASA VSHDLYASVF NKGCSSEQEL RVSKITTVLL
GILAVVLGIA FEKENVAYMV MLAFVIACSS NFPVLFMSVL WKNCTTKGAV VGGFVGLASA
VVLTIGSASV WEAVMHNPKG SAWFPYNSAA IFSMTAAFVT IWLVSILDNS AQAKKERALY
PSQQLRSETG LGASTASSH
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