| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0390 |
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| Symbol | |
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| ID | 3569861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 425296 |
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| End bp | 427638 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637678832 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_283619 |
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| Protein GI | 71906032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.3876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGGCG CGGATTGGCC GATTTCCTGG CGCGGGTGGT TGAGCCGCCG TCCGCGCTGG
CAGTGGGGCG CGCTGCTCGC CCTGCTGCTA CTGGCGGGCC TTGATGCGGC TTTCCCACCA
CCGGTGCCCG GCCGCGATGC GCCGAATGCG CTGCTGATCG TTGCCCGCGA CGGCACGCCG
CTGCGGGCCT TTCCGGACCG CGATCATGTC TGGCGTCATC CGGTGGCGCT TGCAGACGTC
TCGCCGCTCT ACCTGCAGGC GCTCGAACGT TACGAAGACC GCTGGTTCCG CTGGCATCCC
GGCGTCAATC CGCTGGCACT GACGCGGGCC GCCTGGCAAT GGGCATGGCA TGGGCGCATT
GTCTCCGGCG GTTCGACGCT GACCATGCAG GTTGCCCGCA TCATCGCGCC GACGCCGCGC
ACGCTGCCCG GCAAGGCCCG GCAGATCCTG CGCGCCCTGC AACTCGAACT GCATTACTCC
AAGGATGAAA TCCTCGCCAT CTACGTCAAT TACGCGCCGA TGGGCGGGGT TCTCGAAGGC
GTCGAAGCGG CCAGTCGGGC CTATCTCGGC AAGCCGGCCA AGCGCCTGAG TCATGCCGAT
GCAGCGCTGC TCACTGTTTT GCCGCAAGTG CCGTCGCGCT TGCGGCCCGA TCGCCAGCCA
GCCCGCGCCC GTGTCGCCCG TGACAAGGTG CTGCACCGCA TGGCCGGCGT CTGGCCGGAT
GCCGAAATCC GGGATGCGCT GCAGGAGCCG ATCATCGCCC AGACCATCCG CGATCCCCTG
CTGGCACCGT TGCTGGCCGA GCGCCTGCGC AAGGAAGCGC GTGGCCGGCT CCGCATCGAC
ACGACCATCG ACGCGCAAGC CCAGCAGACG GTCGAGCTGT TGCTGACCAG CCGCCTTGCC
GCCTTGCCGC CGCGTGTTTC GATGGCCGCC ATGGTCGTTG ATAACGAAAC GCTGGAAGTC
CGGGCCTATG CCGGTTCGGC CGATTTCGGC GACGTCGACC GCTTCGCCTT CGTCGACATG
GTGCGCGCCT CGCGTTCGCC CGGCTCGACG CTCAAGCCCT TCCTCTACGG GCTGGCACTC
GACGAAGGGT TGATCCACTC CGAATCGCTG CTCGCCGATG TGCCGCAATC CTTCGGCGGC
TATCAGCCGG GCAATTTCCA GCAATCCTTC CACGGCGCGG TCAGCGTTTC CGAAGCACTG
GCCAAGTCCC TGAACGTGCC GGCCGTCGAG GTGCTCGACC GGCTGGAAGC GAACCGCTTC
GTTGCCGCGC TGCGCCGCGG TGGCCTGAAG CTGGATTTCC CCAAAGGCGA AACGCCCAAC
CTGTCGGTCA TTCTCGGCGG GGCCGGAACG ACGCTGGAGC AACTGGTCGG CGCCTACACC
GCCTTCGCCC GTCAGGGCGT GTCTGGCAAG CCGCGCTATA CGCTGGATGC GCCGCTTGTC
GAGCAGCGCA TGCTGTCGCC GGGCGCCGCC TTCATCATTC GCGACGTGCT GGAGTCCGGC
GGACCGGTCG GTCGCGCCGT CGAACAGGGA CCGGGCATTC GCCGCGGCAT CGCCTGGAAG
ACCGGGACCA GCTTTGGGTT TCGCGACGCC TGGTCGATCG GCGTGTCGGA TCGTCTGACC
GTCGGCGTCT GGATCGGCCG GCCGGATGGC ACGCCCAATC CGGGCTTTTT CGGCGCCAAT
ATTGCCGCGC CGCTGCTGGT CGATATTTTC GATGCGCTCG ACCATCAGCC GGCTACGACG
CGCGTTCCCC CGCCTTCCGT GCAGCAGGAA AAGATCTGCT GGCCGCTGGG TACGCGCTTC
GATCCGGCCG AAGAGAGTTT GTGCCATCGG CAATCGCTGG CCTGGGTGCT GAACGGCACG
GCACCACCGA CTTTTCCGGA TCGTCTGCGC AGCGGCGAGG TGCGCTACAG CTACGAGGTC
GATGCCGTCA GTGGTTTGCG GGTAACGCCC GAATGCAGTT CGCGACCACG CCGCTCGGTC
GAAGCGGTGC GCTGGCCGGC GGCCCTGGAG CCTTGGCTGA GCGCCGACAT CCGGCAAAAG
GCCCAGACGC CACCCTGGGA TACCAAGTGC CAGGCGAAGA ATGAGCCGGA AGCCGGCCTG
CGTATCGTCG GCTTGACCAA CGGCGAGGTG CTGAGACGCC CGCGCCCGGA TCAGCCACCG
GTGATCCGCC TCGAACTGCG CGGCCATCGC GGACAGGTCT ATTGGCTGAT CAATGGCCGG
CTCGTTGCGC ATCGTTCGGC TTCGATGCCG CTGATCCATC GGCTGGAAGA AACCGGGCGG
GTCGATATCA CCGTGATGGA TGATCAGGGG CGGTTTGATC GACTGACGGT CAGCGTGAGG
TAG
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| Protein sequence | MRGADWPISW RGWLSRRPRW QWGALLALLL LAGLDAAFPP PVPGRDAPNA LLIVARDGTP
LRAFPDRDHV WRHPVALADV SPLYLQALER YEDRWFRWHP GVNPLALTRA AWQWAWHGRI
VSGGSTLTMQ VARIIAPTPR TLPGKARQIL RALQLELHYS KDEILAIYVN YAPMGGVLEG
VEAASRAYLG KPAKRLSHAD AALLTVLPQV PSRLRPDRQP ARARVARDKV LHRMAGVWPD
AEIRDALQEP IIAQTIRDPL LAPLLAERLR KEARGRLRID TTIDAQAQQT VELLLTSRLA
ALPPRVSMAA MVVDNETLEV RAYAGSADFG DVDRFAFVDM VRASRSPGST LKPFLYGLAL
DEGLIHSESL LADVPQSFGG YQPGNFQQSF HGAVSVSEAL AKSLNVPAVE VLDRLEANRF
VAALRRGGLK LDFPKGETPN LSVILGGAGT TLEQLVGAYT AFARQGVSGK PRYTLDAPLV
EQRMLSPGAA FIIRDVLESG GPVGRAVEQG PGIRRGIAWK TGTSFGFRDA WSIGVSDRLT
VGVWIGRPDG TPNPGFFGAN IAAPLLVDIF DALDHQPATT RVPPPSVQQE KICWPLGTRF
DPAEESLCHR QSLAWVLNGT APPTFPDRLR SGEVRYSYEV DAVSGLRVTP ECSSRPRRSV
EAVRWPAALE PWLSADIRQK AQTPPWDTKC QAKNEPEAGL RIVGLTNGEV LRRPRPDQPP
VIRLELRGHR GQVYWLINGR LVAHRSASMP LIHRLEETGR VDITVMDDQG RFDRLTVSVR
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