| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0376 |
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| Symbol | |
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| ID | 3569679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 409681 |
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| End bp | 410826 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637678818 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_283605 |
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| Protein GI | 71906018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.000374663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000123514 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCACA GCATGAAGAA ACTCGTTGTC GCAGCCGCAC TGACCTTCGG TGCCTTTGGT
GCCTTCGCCG CCGATCCGAT CAAGATAGGC TCGGTGCTCT CCGTCACCGG TCCGGCTGCT
TTCCTCGGCG ACCCGGAACT GAAGACGCTG CAACTGTACG TTGATGACAT CAACAAGAAG
GGTGGCGTTC TCGGTCGCCA GTTGCAACTG GTCCATTACG ACGACGGCAG CGATGCCAAC
AAGGCCAACG GCTTTGCCAA GCGCCTGCTC GAAGACGACA AGGTCGACGT GCTGGTTGGT
GGCACCACCA CCGGTTCCAC CATGTCGATG GTGCCGCTGG CTGAAAAGTC CGGCACGCCG
TTCGTCTCAC TGGCCGGTGC CGTGGTCATT GTCGAGCCGG TCAAGAAATT CGTTTTCAAG
ACCCCGCACA CCGACCGCAT GGCCGCCGAA AAGGTCTTCG AGGACATGAA GAAGCGCGGC
CTGACCAAGG TGGCGCTGCT TTCCGAAACC TCCGGCTTCG GCGCTTCCGG CAAGAAGGAA
ACCGAAGGCG TCGCCGGTAA GTACGGCATC ACGCTGGTCG CCAACGAGAC CTATGGTCCG
AAGGATACCG ACATGAGCCC GCAGCTGACC AAGATCAAGA CCACGCCGGG TGTTCAGGCC
GTGTTCGTGT TCGGTCTGGG CCAGGGGCCG GCCATCGTGA CCAAGAACTA CAAGCAGCTT
GGCGTGACGC TGCCGCTGTA CCAGTCGCAT GGTGTGGCTT CCGACGAATT CCTGAAGCTG
GCTGGTCCGG CCGCCGAAGG TGTCCGTCTG CCGTCCCCGG CTCAGCTGAT CCCGGAAAAG
CTGGCCGCCA AGGATCCGCA GAAGCCGGTC GTGACTTCCT ATGAGCAGAC CTACAAGGCC
GCCTACAAGG CCGACGTGTC GACCTTTGGC GGCTACGCCT ACGACGGCCT GATGCTGGCG
GTCGACGCCA TCAAGCGCGC CGGCGGCACC GACAAGGCCA AGGTGCGTGA TGCACTGGAA
GCGACCAAGG GCTTCGTCGG CACCAGCGGC ACTTTCAACA TGTCGGCCAC CGATCACATG
GGCCTCGACC TCTCCGCTTT CCGCATGCTG GAAGTGAAGG GCGGCGACTG GTCCATCGTC
CAGTAA
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| Protein sequence | MKHSMKKLVV AAALTFGAFG AFAADPIKIG SVLSVTGPAA FLGDPELKTL QLYVDDINKK
GGVLGRQLQL VHYDDGSDAN KANGFAKRLL EDDKVDVLVG GTTTGSTMSM VPLAEKSGTP
FVSLAGAVVI VEPVKKFVFK TPHTDRMAAE KVFEDMKKRG LTKVALLSET SGFGASGKKE
TEGVAGKYGI TLVANETYGP KDTDMSPQLT KIKTTPGVQA VFVFGLGQGP AIVTKNYKQL
GVTLPLYQSH GVASDEFLKL AGPAAEGVRL PSPAQLIPEK LAAKDPQKPV VTSYEQTYKA
AYKADVSTFG GYAYDGLMLA VDAIKRAGGT DKAKVRDALE ATKGFVGTSG TFNMSATDHM
GLDLSAFRML EVKGGDWSIV Q
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