Gene Daro_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0350 
Symbol 
ID3569823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp383695 
End bp384900 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content57% 
IMG OID637678792 
Productaromatic hydrocarbon degradation protein 
Protein accessionYP_283579 
Protein GI71905992 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000805243 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAATAAGA TGAACCTGCG TATCGTCCCA GCACTGCTGT TGGCTATCTT TTCCGGCACC 
GCCTCGGCTG CTGCCTTCCA GCTTTGGGAG CAAAATGCCA GCGGCCTGGG GAATGCTTAT
GCGGGCTCGG CAGCGGTGGC GGATAACGCC AGTACGGTTT TCTTCAATCC GGCGGGGATG
ACGCAACTGT CAGGCTTCCA GTTCTCTGCT GGGGTAACCG GGGTTGGGCC GAGCTATGAG
TTTCGTGACA ATGGCTCGAC CGGAGCATTC AAGGGTAGCG GCAACGGCGG TGACGCGGGC
GGCTGGAATG CCGTTCCCAA TCTCTATTTG TCCGGGCATC TGACCGATAA TCTTTCGATC
GGCTTTGGCG TTTCGGCCCC ATTTGGGCTG GCGACTGAAT ACGACAGCAA CTGGGTCGGG
CGTGTTCAGG CGATCAAGTC AGAGATCAAG ACCGTCAACT ACAACCCGTC GCTTGCCTAT
CGCGTCAACG ACAAGGTTTC GCTGGGTTTT GGCATCAATT ATCAGCAACT GGATGCTGAA
ATTACCAGTT ACACCCCGGC TGGTCTCTAC CGGGTCAAGG GTGACGATTC GACCTGGGGA
TGGAATGCCG GTGCTTTGTT TACACTTTCT CCCGCCATGC GCGTTGGTGT GTCTTACCGC
TCGGCAGTGA ATTACACGCT GGAAGGAACC CGTTCGGTCG GGGCTAATTC CGTTGCCGCC
AAGGCGGACA TCAAGCTGCC AGATACTTTT ATCCTGTCGG TCTGGCAACA GGTTTCGGAT
CGTTGGGAAG CGATGGGCGA TTTGTCCTAC ACGCGCTGGA GCACCCTGGA TCGTCTGGAT
GTTCGCAGCT CCGCTGGCGT TGATACCGAG ATCTTCAACT ATGAAAACTC CTGGCGACTT
GCCTGGGGTG CTGCCTACAA GGCCAGTGAT GCACTCAAGG TGAAATTCGG TATTGCCTAT
GACCGGACGC CGGTGCGCGA TGAATACCGT TCGGCTCGCG TGCCCGACAA CGATCGTTTG
TGGTTGTCGC TGGGCGGACA GTGGAATGCC GGTCGCTATG GCAAGGTCGA TGTCGGCTAC
TCCTATCTTT ACGTCAAGGA CCCGTCTATC CAGCAGTCCA AGGTGGTGGG AGTAGCCCAC
GAATTGCGTG GCGATTACAA CGCCAGTGCC CATATCGTTG GCGCGCAATA CTCGGTGGGT
TTCTAA
 
Protein sequence
MNKMNLRIVP ALLLAIFSGT ASAAAFQLWE QNASGLGNAY AGSAAVADNA STVFFNPAGM 
TQLSGFQFSA GVTGVGPSYE FRDNGSTGAF KGSGNGGDAG GWNAVPNLYL SGHLTDNLSI
GFGVSAPFGL ATEYDSNWVG RVQAIKSEIK TVNYNPSLAY RVNDKVSLGF GINYQQLDAE
ITSYTPAGLY RVKGDDSTWG WNAGALFTLS PAMRVGVSYR SAVNYTLEGT RSVGANSVAA
KADIKLPDTF ILSVWQQVSD RWEAMGDLSY TRWSTLDRLD VRSSAGVDTE IFNYENSWRL
AWGAAYKASD ALKVKFGIAY DRTPVRDEYR SARVPDNDRL WLSLGGQWNA GRYGKVDVGY
SYLYVKDPSI QQSKVVGVAH ELRGDYNASA HIVGAQYSVG F