Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0318 |
Symbol | rpsJ |
ID | 3569772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 365564 |
End bp | 365875 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637678760 |
Product | 30S ribosomal protein S10 |
Protein accession | YP_283547 |
Protein GI | 71905960 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0051] Ribosomal protein S10 |
TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1.1858999999999998e-21 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000342143 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAACC AGAAAATCCG TATCCGTCTC AAGGCCTTCG ATTATCGCCT GATCGATCAA TCCGCTCAGG AAATTGTTGA GACCGCCAAG CGTACCGGTG CTGTTGTTCG TGGTCCTGTT CCGCTGCCGA CCCGTAAGCA GCGTTTCGAC ATCCTGCGTT CGCCGCACGT CAACAAGGCT TCCCGTGATC AGCTCGAAAT CCGTACCCAT CTGCGTCTGA TGGATATCGT TGATCCGACC GACAAGACGG TTGATGCGCT GATGAAGCTG GATCTGCCGG CAGGTGTCGA CGTCGAAATC AAGTTGCAGT AA
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Protein sequence | MANQKIRIRL KAFDYRLIDQ SAQEIVETAK RTGAVVRGPV PLPTRKQRFD ILRSPHVNKA SRDQLEIRTH LRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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