Gene Daro_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0246 
Symbol 
ID3569638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp287393 
End bp288721 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content63% 
IMG OID637678684 
Productpeptidase M48, Ste24p 
Protein accessionYP_283475 
Protein GI71905888 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC ATCAATCACT GGCAGACAAT CTGCTCCATA ACAGCATCAC CCGCCGCCAG 
ATGCTCTGGC TGATTGGCGC CAGTGCCTTG TCCGGCTGTG CCTCGTCGCC GATCGGTGGG
GGCGCCATCC TGGTCGGCAT GAGCGAGGAC GAGGAAAAGG CTGTCGATCA GAAGGTAGCC
CCACAGCAGT TTTCGCAGGA TCTGGGGGCG GTGCAGGATG CGCCGATCAA CCAGTACCTG
ACGGAAGTCG GCCAACGTTT GCACAGCAAG TCGCACCGGC CGCAGATGCC CTATTCGTAT
CGTGTGCTGA ACGCCAACTA CGTCAATGCC TACACCTTCC CTGGCGGGGC GATGGGGGTG
ACGCGCGGCA TTCTGGTCGA TCTCGACAAC GAGGCCGAGC TGGCGGCCTT GCTCGGTCAC
GAGCTGGGTC ACGTCAATGC CCGTCACGCC GCGCAGCGGC AGGGTACGGC GATGGTGACG
CAGGTGGCGA TGACGGGCGT GAATATCATC GGGGCGGTGG CCGGGGTTGG CAGCCTGACC
GATATCGGTA CCCAGCTCGG CGCCAGTGTG CTGCTCGCCA GCTATTCCCG CGACAACGAG
CGCGAAGCTG ATTCGCTGGG GCAGGAATAC ATGGTGCGGG CCGGCTATCC GGCCAGCGGC
ATGGTCGGCC TGCAGCAATT GCTGGTCGAT CAGCAGAAGG AATCGCCGGG TATGCTGAAA
ACCATGTTCT CGACCCACCC GATGAGCAGC GAACGGCGCG ACACTGCGCG GCAACTGGCC
GAGAGCAAGT ATGCGGCGAG CAACACGCGC GATGCCGGGC GCGACCGCTT CCTGGACAAC
ACTGCTTCAC TGCGCCGCAT CAAACCGACC ATCGATGCCT GCCAGAAGGG TGAAGTGGCC
ATGGCCGGCA AAGCCTACGG CAAGGCCGAG GAGCAGTTTC GTACGGCCTT GAAGGCAACG
CCGCGTGACT ATGCGGCCAA TGTGCTGATG GCCAAGTGTC TGTCTGTTCA GGACAAGGAT
GCGCAGGCCA TGGAATACGC CCAGACGGCG ACGAAGATTT ATCCGCAGGA GGCGCAGGCC
CAGAAGATGG TCGGCATCCT GGCGCTCGGC CAGAAGGATC CGGCCAAGGC CTACGAGCAT
CTCGACCGCT ACGATCGCCT GATGCCGGGG GATGCCGGGG TGACCTTCCT CAAGGGCGTC
TCACTGGAAG GGCTGGGGCG CCAGCAGGAG GCGGCCAACC AGTATGCCGC TTATCTGAAG
CGGACCCAGA AGGGCAAGGC GGCAGAGTAT TCCTACAGCC GGCTGCAGAG CTGGGGCTAT
GTGAAATAG
 
Protein sequence
MSQHQSLADN LLHNSITRRQ MLWLIGASAL SGCASSPIGG GAILVGMSED EEKAVDQKVA 
PQQFSQDLGA VQDAPINQYL TEVGQRLHSK SHRPQMPYSY RVLNANYVNA YTFPGGAMGV
TRGILVDLDN EAELAALLGH ELGHVNARHA AQRQGTAMVT QVAMTGVNII GAVAGVGSLT
DIGTQLGASV LLASYSRDNE READSLGQEY MVRAGYPASG MVGLQQLLVD QQKESPGMLK
TMFSTHPMSS ERRDTARQLA ESKYAASNTR DAGRDRFLDN TASLRRIKPT IDACQKGEVA
MAGKAYGKAE EQFRTALKAT PRDYAANVLM AKCLSVQDKD AQAMEYAQTA TKIYPQEAQA
QKMVGILALG QKDPAKAYEH LDRYDRLMPG DAGVTFLKGV SLEGLGRQQE AANQYAAYLK
RTQKGKAAEY SYSRLQSWGY VK