| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0245 |
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| Symbol | |
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| ID | 3569637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 280552 |
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| End bp | 287079 |
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| Gene Length | 6528 bp |
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| Protein Length | 2175 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637678683 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_283474 |
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| Protein GI | 71905887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.203155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGC ACCCGTGTCC AATCTCCCAC AAGCATCTTC GTGGAGTGGC AAACTCCTTG
GCTGCCCGAG CAGCCACTTC AAGCGCAGCG CATCGTGAAC GCGCCACTGT CCAAGCGCTG
ATTCGGCAGA TGCTGATCAG CCTCGCCATT GCGCAGCTTT TCCTTCCGTT GCCGGGGAAG
CTCCATGCCG AACCCGACCC CTGTAGCCTG CAAACACCCA GCAGCGTGCT CTGCAACGGT
AATCAGTCCG GCGGCATTGC GACAGGCCGC ACGCTGCTGA TCGACGGCAG CACCCTGCAA
TCGCCACCGG TCACAAGCAT CGACGTCAAT ACACTCAACG CTGCGGTCGC CCCCGGTAGC
GGCTTGCCGG GCATCTACCT GCATAACGAA GCCGGCAATG CCGTGACCAT CAATGCTGGA
ACCTCCCTGG CGCCGATTTC CATCACGGCA AACGGCGACA ACACAGGCGG TATCGTGGTG
AACGGTTTCG GAACGCCAAC CCAGACCAAC AACTTCTTCG GCCTGCCTTT GCCGTCCGGA
AGCGGCGGAA CGGGCGGCAA CGTGACAGTT AACAGCTTTG CAACGATCAG CACGGATGGC
GATCAAAGCC CCGGTATCAG CGCCCGCAGC CGGGCGGGCG GTTATTCCGA TGCTGTCGTC
AACACGTACA AGCAGCTCCT CGGCACCAAC CAGGGGGCCA CCTTCGGCAT CAGCACGGTG
CAAGGCGACA GCGCCAAGAT CGGCCAGGCA GTCACCGGCT CCAACGGCGG CACATTTACC
CTGAAGAACA ACCTCCTGGG ACTCGCCCCC GCCTACACCT ACAACCTCAG CGGCATGGCG
CTCAATAATC TGGCGCCAGG GCAGCACATC GACACCTCGG TGTCCTATAC CGTGACCTCG
ATCATCGGTT ATGCCCCATC CAACGCCGTA CTCACGTTGC GCGTCACGCG CCTGGCCGAT
GGGTCGCTGA GCGTCTTGCC GGCAACGTAT TTCGACGTGT ACGGGCGCGC CTACGAGGCA
CCGCAGGCCA TTGCCTACGT CGACGGCGCA ACGCCCCTGT CGGGCCAGAT TTCGCTGGCG
CCCAACTTCG ATGCCTACAT GACCCGCCTG CTGGAAGATT CCGCCATCGG CGGGGCCGGC
GGCAATGTCA GCGTAACGAC CAGCGGCTCG ATCACGACGA AGAACGCGCT CTCGTTCGGC
CAGGCGTCGT ACGGCATCCT GGCTCAAAGC AAGGGCGGCA CCGGGCTACC CGGTGGTGGC
GGCGTTTTCA GTGGTGACAC CGGCAATGCC GGCTCGTCGG GTGGCAGCGT CATGGTCAAC
AACACAGCGA CCATCCACAC CTTTGGCGAA GGCGCCCACG GCATCGTTGC TTCCAGTGCC
GGCGGCAACG GTGGGCGCGG CGGCGGTGCC AGCTTTGCCG GCAACGGCGG CGCGGGTGGC
ACGGGCGCCA AGGGTGGCGA AGTCACTGTC ATCAACTACG GCAACATCAC CACCGAGTCG
ACCAACGCCT TCGGCATCCT GGCCCAGACG CTCGGTGGCC AGGGCGGACA GGGCGGCGGC
GGCGGCTGGC TGGGAGGTGG CGGCGGCGCA GGCGGCGCGG GGACGGTGAA CGATCCGGTC
ATCGTCGGCA ACGCGGGAAC GATCACGACC TTCGGTGACG ATTCGCATGG CATTCTGGTC
CAGAGCATTG GCGGATTCGG TGGTGGAGGC GGCGGCGCAG GGGGTATCGT GGCCCTGGGC
AGCACCGGCG GCAATGCCGG GACGGGAGGC ATCGCAACGA TACTTAACCT CGGCAAGGTA
AGCACCGCGG GCTGGAACGC CAACGCGCTG ATGGCCCAGA GCATCGGCGG CGGGGGCGGC
AGCGCCGGCG GGACGGGCGG GCTCGTCGCG CTGGGTGGCG ACGGAACGGC AGGCGGCAAC
GGCGGGATGG CCTCGGTGTA CAACTACGGC GAACTGAACG CCACCGGTGT CGGCGCACGC
GGCATCGTTG CCCAAAGTAT CGGTGGTGGC GGCGGCCATG GCGGCGACTC GGGCGGACTT
GTGGCCATCG GAGGTGACGG CGCCACCACC AGCGATGGCG GCGCCGTCAT TGTCGGCAAC
ACGGGCAAGA TCACCTCGGC CTCCAACGCC ATCCTCGCCG AAAGCATCGG CGGCGGCGGC
GGCACCGGCG GATCGAGCGG CGGCTGGTTC GGCGTCGGCG GATCCGGCGG CGGGGGTGGG
AATGGCGGCA CGGTCACGGT CGCCAATAGT GGCGACCTGA CGACCTCCGG GCGCAACGCA
GCGGCGCTTT TCGCGCAGAG CGTCGGCGGC GGCGGCGGCA ACGGCGGCAA TGTCGTCGCC
GTCGGGGCGT TTGCATCGGT TGCCATCGGC GGCGCTGGCG GCAATGGTGG CGACAGCGAC
AAAGTCGTGG CGAAGAGCAC CGGCGGAAGC ATCGAGACAT GGGGTGTCCA GTCGCATGGC
ATCTATGCCC AGAGCGTGGG TGGACGCGGC GGCAATGGTG GCTTTGCGGC CGCTGCCTCG
GCCGGCAAAG GCCTTTCTCT CTCGCTGTCC GTCGGACGTA GCGGTGGTGG TGGCGGGGAT
GGAGGAGAGG TACAGGTCGA AAGCCAGAGC ACGATCACGA CGCACGAACA GGACGCATAC
GGCATCTATG CCCAGAGCGT CGGTGGTGGC GGCGGTAACG GCGGGTTCTC CGTAGCTGCC
AGCGCAGCCG TTCAGGGCGT GGCGGTTTCC TTCTCGGTGG GTGGCAAGGG CGGTGTGGCA
GGCGACGGCA AGAAGGTGGA GGTCGGCAAG GACGCCCCGA TCACCGGAAA GATCACCACG
AACGGCGCGA ATGCTTACGG TATCGTTGCC CAAAGCGTCG GTGGTGGCGG CGGACATGGC
GGCCTGGCCG TGGCAGCCAC GCTTTCGGCC GGCACGAACG GCAGTGGCAG CCTTGGCCTC
GCGCTCGGCG GCGAGGGTGG GTCCGGAGGG GCCGGTGGGG CTGTCGTTGT CAATAGCGCA
GCCACCATCA GCACGCAGGG TGAGAAAGCC TACGGGATCA AGGCGCAGAG CGTCGGCGGC
GGCGGCGGTG ATGGTGGCCT TGCCGTCGCA GGTGGCGTGG GCGGCGGCTT GGGCTCGGAT
TCGCTCAAGC TCAATGTCGC CGTGGGCGGC TCGGGGGGCG CGGGCAGTAT GGCCAGCACG
GTTGATGTCG ACATCAGCGG TGGCAGCATC GAAACCTGGG GCAAGAATGC GCATGGCGTG
TTCGCCCAGA GCGTCGGCGG TGGTGGCGGC GATGGTGGCA TCGCCATCGC CGGGACACTC
GGACTGGGTG GCAAGAACAC GAACGTCAGT ATTTCCGCCG GTGGCGTTGG TGGCACAGGC
AGCATCGGCG ACACCGTCAC CGTGAGCAAC GCCGCGACGA TCAAAACGCA CGGCGAAGCT
GCATTCGGCA TCTTCGCGCA GAGCCTGGGC GGGGGCGGCG GGATTGGCGG AGCCGCGTTC
AGTGGCGCCG GAGACCTGAA CATCGGTCAG GAAGGCTATA ACGTCAATAT CGATTTCGCC
TTCGGCGGCA AGGGCGGCTC AGGCAACAAG GGCGGCATGG TCGATATCAC CAACACGGGA
ACGATCGAGA CATTTGGCAC TGCTTCGCAC GGCATTTTTG CCGAAAGCGT CGGTGGCGGT
GGCGGACAGG GCGGCAGTGC GCGCACCATG TCAATCAATG CCGCCGTAAT GCCGGTCAGC
ACGCTAGGCA AATATGCGTC GTTCAGCCTT AACCTCGGTG GCAAAGGCGG TTCAGGCAGC
GATGGCAATA CGGTCGACAT TGATAACCAG GGCACGATCA TCACGCATGG CGCCGACTCC
CACGGCATTT ACGCGCAAAG TGTGGGCGGA GGCGGCGGCA CCGGTGGCGA AGGAGCGCAT
GGTTTCTTCG GCATTCCGGC CTTGATGTTC GACAAGACAC CGATGTACCA GCAGGTATCC
ATCTCGATGG GCGGCAGTGG CGGCGCAGCG GGTAGTGGCG GCGCGGTCAA TGTCATTCAG
CACGGCAACA TCACCGCCCA TGAGCAAGGA TCAGATGGCA TCTTCGCGCA GAGTATCGGC
GGCGGCGGCG GCACGGGCGG TGTCGGGGCC ATCGGCTTTA CCGGCACGGT CGGGATCGGC
GGCTCAGGCG GCGCCTCCGG CAATGGCGGC AAGGTCGATG TGATCGTCGA TGGCAACATC
AACACCTACG GCGGTGCCGG CTATGGCGTT TTTGCCCAAA GTATCGGCGG CGGCGGCGGC
ATCGGCGGCA ATATCGACCG GGGCCTCGCC ACCAGCTGGA ACGTGGGGCT CGGGATTGGC
GTCATTCGCA ATTCACAGAA TGGCGGCAAC GGAGGTGAGG TGACGGTATC CGGTAGCGGC
CTGATCCACA CCCGGGAACT CGGCGCCACG GGTATTTTCG CGCAGAGTGT TGGTGGCGGC
GGCGGCGTGG CCGGCTACCA GAATCAAAGC TGGTGGGGTT TTGCCGGAAG TGCCGGCGGC
AACGGTTCAG GGGATCGTGT CACGGTCGAC TGGCGTGGCA GCATCTGGAC TGACGGCGAA
AACGCTCACG GCATCTATGC CCAGAGCGCT GGCGGCGAGG CTGTCGACGT GGTCGTTTAC
GATGAAAACG GAAATCCTAC GGCGAAGACG CTGCAGGGCT ATCAGAACCT CGGGAAGGAT
GTCAGCGTCA CTGTCAGGGG CAACGTGATC ACGAGCGGGG TACGGTCGAA TGCCATCTAC
GCGGAGAGTT CGGGCGCCGA AGGCAAAGGC AACATCACCG TGAAGATTCT TGAGCAGGGC
ACAGTGAAAG GGGGATCGGG AGCGGACGCT GCCGGTGTTC ACCTCGTGGG TGGCACCCAG
AACCTGATTG AGAATACCGG GTACATCGGC ACGGTCAGCG GCATCAGCGG GCTCGCGATT
GCCGGCGACA CCGGCAACGA CGTAGTGAGC AGCAGCGGCA CGGTGACTGG CTCCGTATCT
CTGGGCACAG GCACCAACGC TTTCACGAAT GCGTTGGGTG GTCTCTTCAA CAGCGGGCCA
CTCGTCGACC TCGGTGCTGG CAACCAACTG ATCAACAGCG GCACGCTGGC CCCCGGCGGC
CTAGGTTCGG CTGCGACGAC GACACTGACC GGCAACCTGC GGCAGAACAG CAGTGGTTCC
TTGGCAGTCG ACCTCAGTCT GGCCGGACGG GCCAGCGACC TGCTGAATAT CGTCGGCGCC
GCGCAGGTCG ACGGCAAGTT GAGCGTGCGT CCGGTAGATA CCGGGTTTGC CCGCCCCGGC
ACCCTGCGCA GCGTGGTGCT GACCGCCAGC GACGGTGTAT CTGCCGCCGA TCTGACGCTT
GCCGCACCGC ACTCCTTGCT GACCAGTTAT GTGCTGCTCT ATCCGAGCGC CAACGAGATC
GCCGTTACCC GCAGCATCGA TTTCGCGCCC CGCTCGCTCA ATCCGAATGC TCAGCGCATC
GGTGCCCACC TGAACGCCAT CCAGGCAACA GGTGGTACCG CCAGCCTGGC CCCTTACATC
GCCGCACTGT TCGCCCAGCC AGACGACCAG AGTCTCGCGA CGGCCTACGA AAAGCTCGGT
CCGGGCGCGC TAGGGACGTT GACCAAGTCA TCAACTGCAT CCAGCCTGGA ATTCAACGAC
GCGATGCATA GTTGCCGTCA GCGCGATGGC GACTATCGTT TCATCCGGGA AGGGGAATGT
AGCTGGATTC GTTTCGGCGG CAGCATTCGC GATCAGGAAA GGGATGATCA GAATCCGGGC
TACAGGCAGG ATATGGTCAC GATGGCCGGC GGCTTCCAGA AGGCGGTACG CGAAAACCTG
CACCTCGGCC TCGGCGTCTC CTACCAGCAA TCTGCGCTCA ACTCGGTCTT TTCCGATGTC
AATGGCGAAC GCTTCGAGGG CGGCATGATC GTCAAGCAAC GCTTCGACGC GACCCGCCTG
TCCCTGTCCT TCAGCGCCGG CTATGGTCAC TACAACACCC GGCGCCTGGT CGACATCGCT
GCACCGGGCA CCTATGCCCA GGCCAGGCCA ACCTTGTGGT CGGGCGCCCT GCACGGCCGG
ATCAGCCATG ACATCATGGC CAGCGAAAAC GCCTACATCC GCCCGATGCT CGGCCTGGGG
GTCTCCTACG TATCACGCGA TGCGTATGAC GAAACCGGGG CCGGCGGTGC CAATCTGCGT
GTCGAAAAGG CCAGCGATAC CTTCGTCTCA CTGCATCCGG CCATCGAGTT CGGCGGTGAA
AACAGTATCG GCGGCGAGGG AACCCTGCTC CGCCATTTCG TACGCGTCGG CATGACCCAG
TTCATCGGCA GCAGCGAACA CCACGTCACC GCCAGCCTGG AAGGTGCGCC ATCCGGCGTC
CAGCCTTTCA CGGTCACGAC AACGAGCGAC AAGACCTATG CCGATCTGGT CATTGGCGTC
GATATCCTGC GCAAGAGCGG GACCACCGTT CGCCTGGAAT ATAGCGGTCA GTTCTCGAAC
AACAGTTCGA CCAATGCGAT CGGCGTGAAG GTGGCGATGC CGTTCTGA
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| Protein sequence | MSAHPCPISH KHLRGVANSL AARAATSSAA HRERATVQAL IRQMLISLAI AQLFLPLPGK
LHAEPDPCSL QTPSSVLCNG NQSGGIATGR TLLIDGSTLQ SPPVTSIDVN TLNAAVAPGS
GLPGIYLHNE AGNAVTINAG TSLAPISITA NGDNTGGIVV NGFGTPTQTN NFFGLPLPSG
SGGTGGNVTV NSFATISTDG DQSPGISARS RAGGYSDAVV NTYKQLLGTN QGATFGISTV
QGDSAKIGQA VTGSNGGTFT LKNNLLGLAP AYTYNLSGMA LNNLAPGQHI DTSVSYTVTS
IIGYAPSNAV LTLRVTRLAD GSLSVLPATY FDVYGRAYEA PQAIAYVDGA TPLSGQISLA
PNFDAYMTRL LEDSAIGGAG GNVSVTTSGS ITTKNALSFG QASYGILAQS KGGTGLPGGG
GVFSGDTGNA GSSGGSVMVN NTATIHTFGE GAHGIVASSA GGNGGRGGGA SFAGNGGAGG
TGAKGGEVTV INYGNITTES TNAFGILAQT LGGQGGQGGG GGWLGGGGGA GGAGTVNDPV
IVGNAGTITT FGDDSHGILV QSIGGFGGGG GGAGGIVALG STGGNAGTGG IATILNLGKV
STAGWNANAL MAQSIGGGGG SAGGTGGLVA LGGDGTAGGN GGMASVYNYG ELNATGVGAR
GIVAQSIGGG GGHGGDSGGL VAIGGDGATT SDGGAVIVGN TGKITSASNA ILAESIGGGG
GTGGSSGGWF GVGGSGGGGG NGGTVTVANS GDLTTSGRNA AALFAQSVGG GGGNGGNVVA
VGAFASVAIG GAGGNGGDSD KVVAKSTGGS IETWGVQSHG IYAQSVGGRG GNGGFAAAAS
AGKGLSLSLS VGRSGGGGGD GGEVQVESQS TITTHEQDAY GIYAQSVGGG GGNGGFSVAA
SAAVQGVAVS FSVGGKGGVA GDGKKVEVGK DAPITGKITT NGANAYGIVA QSVGGGGGHG
GLAVAATLSA GTNGSGSLGL ALGGEGGSGG AGGAVVVNSA ATISTQGEKA YGIKAQSVGG
GGGDGGLAVA GGVGGGLGSD SLKLNVAVGG SGGAGSMAST VDVDISGGSI ETWGKNAHGV
FAQSVGGGGG DGGIAIAGTL GLGGKNTNVS ISAGGVGGTG SIGDTVTVSN AATIKTHGEA
AFGIFAQSLG GGGGIGGAAF SGAGDLNIGQ EGYNVNIDFA FGGKGGSGNK GGMVDITNTG
TIETFGTASH GIFAESVGGG GGQGGSARTM SINAAVMPVS TLGKYASFSL NLGGKGGSGS
DGNTVDIDNQ GTIITHGADS HGIYAQSVGG GGGTGGEGAH GFFGIPALMF DKTPMYQQVS
ISMGGSGGAA GSGGAVNVIQ HGNITAHEQG SDGIFAQSIG GGGGTGGVGA IGFTGTVGIG
GSGGASGNGG KVDVIVDGNI NTYGGAGYGV FAQSIGGGGG IGGNIDRGLA TSWNVGLGIG
VIRNSQNGGN GGEVTVSGSG LIHTRELGAT GIFAQSVGGG GGVAGYQNQS WWGFAGSAGG
NGSGDRVTVD WRGSIWTDGE NAHGIYAQSA GGEAVDVVVY DENGNPTAKT LQGYQNLGKD
VSVTVRGNVI TSGVRSNAIY AESSGAEGKG NITVKILEQG TVKGGSGADA AGVHLVGGTQ
NLIENTGYIG TVSGISGLAI AGDTGNDVVS SSGTVTGSVS LGTGTNAFTN ALGGLFNSGP
LVDLGAGNQL INSGTLAPGG LGSAATTTLT GNLRQNSSGS LAVDLSLAGR ASDLLNIVGA
AQVDGKLSVR PVDTGFARPG TLRSVVLTAS DGVSAADLTL AAPHSLLTSY VLLYPSANEI
AVTRSIDFAP RSLNPNAQRI GAHLNAIQAT GGTASLAPYI AALFAQPDDQ SLATAYEKLG
PGALGTLTKS STASSLEFND AMHSCRQRDG DYRFIREGEC SWIRFGGSIR DQERDDQNPG
YRQDMVTMAG GFQKAVRENL HLGLGVSYQQ SALNSVFSDV NGERFEGGMI VKQRFDATRL
SLSFSAGYGH YNTRRLVDIA APGTYAQARP TLWSGALHGR ISHDIMASEN AYIRPMLGLG
VSYVSRDAYD ETGAGGANLR VEKASDTFVS LHPAIEFGGE NSIGGEGTLL RHFVRVGMTQ
FIGSSEHHVT ASLEGAPSGV QPFTVTTTSD KTYADLVIGV DILRKSGTTV RLEYSGQFSN
NSSTNAIGVK VAMPF
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