| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0244 |
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| Symbol | |
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| ID | 3569636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 277255 |
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| End bp | 280455 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637678682 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_283473 |
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| Protein GI | 71905886 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGA TAAAGGGGCG CAGGAGAGTG AGGCTGACGG CTGACGAAAA GACGGTCCCG
CGTATTCATC TGATTGGCAC TTTGCTGACC GTGCTGGTTC TGACCCTGGC GCTCGGCGGC
TTTTTTTCAT GGCAAAGTCT GAGTGAGCAG CGCGCCGCCT TCGCCCGTGT CGAACTGGCT
GCTACCCAGC AGCTGGAAGC CCGCCTGCAG GCCGAGATGG ACGGGGTGAC CAATTTCATC
GAATTCACCC GTTCGCGGAC CGAGGATGTG CTGCGCCGCA GCCTGACCGA ACAGGTCGAT
ACTGCCTACC AGATCGTCGA ATCCATCTAT GCCCAGGAGG CACGGCGTCG GCCGCCGGCC
GAGGTCAAGC GCCTGATCAT CGAGGCACTG CGCCCGGCCC GGTTTTACGA AGGGCGCGGT
TATTACTTCA TCGACGACAT GCAGGGCCAG TTCATCCTGC TGCCGACCGC GCCGCAGCTG
GAAGGCAAGA CCATCCTCGA CAACCGGGAC GACACCGGCC ACTACATCAT GCGTGGCCTG
ATCGAGGCGG CACGCCAGCC GCGCGACGAA GGTTTCTCAC GTTATCGCTG GTACCGGCCC
GACGATGCAA CGCAGATGGC CGACAAACTG GCATACGTCA GGCATTTCGC CCCCTACGAC
TGGCTGATCG GCACTGGCGA CTACACCTAC AAGTGGGAGG CGCTACAGCA AAAGGAGGCG
CTGGCCCGCC TGCGCGCCCT GCATTTCGGA CAGAGCGGCC GTTTTGGCGT GCTCGATGGT
AGCGGGCGCA ATCTGCTGTC GCCGAGCGAC AGGGCGCTGG ATGGCATGCT GATCCACGAC
ATGGCGGCAC CGGAAAAGGC TGCCCTCGAA AAGCTGTTGG CGGCAGGCGA GCGCGGCGGC
GGCTTTGTCC GTTATCAATG GCTCAATCCG GAGAACGGCC AGCTGGTCAA TAAAACGGCG
CTGGTCAACG TCGTCAAGCC GTGGAACTGG TTTGTCGTTG CCACCACCTT TGATGATGAT
TTCCAGAGCC TGCTCGGCGA GGAGCTGCGC AAGCACGAGG CCGGCCATGA CCAGCGCCTG
CTCAATCTGC TGATCGCCAT CGTCGCCGCG CTGGGCCTGG GGCTGCTCAG TTCGCTGTTG
TTTTCGCGCT GGTCGAAACG GCTGTTTGCC GACTACCACC AGCAGCGGCT CGCCCAGGAG
GCGGCGCTGC GCGTCCAGGC CGACGAACTG AAGGTGCTGT CGCGGGCGAT CGAACAGAGT
CCGGTCTCGA TTGTCATCAC CGATACCGGT GGTTGCATCC GCTACGTTAA TCCGAAATTC
GAGCAGGTCA CCGGCTATAC CAGCCAGCAG GTGCTCGGTC AGAATCCGCG CATCCTCAGT
TCCGGCGAAA AATCGCCGGA CGAATACCGG GAGTTGTGGC GGACGATCAA GTCCGGCCAG
ACCTGGCAAG GCGAGTTTCA CAACCGGCGC CAGGATGGTT CGCTGTTCTG GGAGCGGGCC
TCGATTTCGC CGATCATCGA CGAGCAGGGG CAGATCCTGC ATTTCCTGGC GGTCAAGGAA
GACATCAGCG AACACAAGCA GATCGAGGAA GCCTTGCGGG TCAGCGAGTA CAAGATGGCG
ACCATCCTCG ATAGTGTCGA GGCCTACATC TACATCAAGG GCACGGATTA CTGCTACCAG
TACGCCAACC GTCGGGTTTG CGAACTGTTC GCGCGGGAGA TGAACGGCAT TGTCGGCCAC
CAGGACACCG AGTTCTTCGA CCCGGCGACT TGCGCCAACC TGCGCCGCAA CGACCGGCGG
GTCATCGAAC AAGGCGAGCG GGTGGTCGAG GAGGAGGTCA ATCGGACGGT GGACGGCCAG
ATCACCAGCG CTTTCCTGTC GATCAAGATT CCGCTGCGCG ACCAGGATGG TCAGATCTAC
GCGTTGTGTG GCATTTCAAC CGATATCACG GTGCGTAAGC AGGCCGAGGC CGAACTGGAA
CACTACCGCC AGCATCTCGA AACCCTGGTC CAGTCGCGTA CCGTCGAACT CGCCCGGGCC
AAGGATGCGG CCGAGGCGGC CAACCGGGCG AAGAGTTCCT TCCTGGCCAA CATGAGCCAT
GAAATCCGGA CGCCGATGAA CGCCATCATG GGCCTGACCC ATCTGCTGCA AAAAGATGTG
CTCGACTCGC GAGCCCGCGA GCGTCTGGGC AAGATCGGCG AGTCGGCCAA TCATCTGCTC
AACGTCATCA ACGACATTCT CGATCTCTCC AAGATCGAGG CCGGGCGCCT GGCCCTGGAA
ATTCGCGAAT TCTCGCCGGA AGCAGTGCTC CGGCAGACGA TCAGCATGCT CGACGAACGC
GCCGCCGCCC AGGGCCTGCG CCTGACCAGC CATCTGGCCA GTGACGTGCC CGCCTTGCTG
TGCGGTGATG CGGTGCGTAT CGGCCAGGCC CTGCTCAACT TCGTCGGCAA TGCCATCAAG
TTTTCCGAAC GGGGCGAAAT TGCCCTGCGG GCCAGGGTCG ACCGCCGGGA TGGCGAGCAG
GTGATGCTGC GCTTCGAGGT TCAGGATCAG GGGATCGGCA TGGATGCCGG GCAGCAGGCC
CGGCTGTTCC AGTCCTTTTC CCAGGCCGAC GATTCGACGA CCCGCAAATA CGGCGGTACC
GGCCTCGGCC TGGCGATCAA CCGGCATCTG GCCCGGATGA TGGGCGGCGA TGTCGGTGTC
GACAGTGCTC TCGGGGTCGG TAGCACCTTC TGGATGACGG TCTGCCTCGC CGTGGCGACC
CGCCAGCCAG AAGCGCTCGC CGCCGATGCC GCGGCCGTTG CCCCGGAGAG CCAGATCGCC
CGCCTGTACG GCGGCCGCCG TGTGCTGCTG GTCGAGGATG AGCCGATCAA CCAGGAAGTG
GCGGCGGAGC TTCTAAGCCT GGCCGGGCTG GTCGTCGAGG TTGCCGTCAA TGGAGCAGAG
GCGGTCGAGC GGGTGCGCCA TGGCACCTAT GCCCTAGTCT TGATGGACAT GCAGATGCCG
GTCATGGGTG GCCTGGAGGC GACCCGTCTG ATCCGCCAGC TACCCGGCAA GGCTGTGCTG
CCCGTATTGG CGATGACCGC CAACGCCTTC GACGAAGACC GCCAGGCTTG CCTGGATGCT
GGCATGAACG ATCACATTGG CAAACCGGTC GATCCCGACC TGTTATATGC CAGCCTGCTG
CGCTGGCTGG CGCACGGCTG A
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| Protein sequence | MNLIKGRRRV RLTADEKTVP RIHLIGTLLT VLVLTLALGG FFSWQSLSEQ RAAFARVELA
ATQQLEARLQ AEMDGVTNFI EFTRSRTEDV LRRSLTEQVD TAYQIVESIY AQEARRRPPA
EVKRLIIEAL RPARFYEGRG YYFIDDMQGQ FILLPTAPQL EGKTILDNRD DTGHYIMRGL
IEAARQPRDE GFSRYRWYRP DDATQMADKL AYVRHFAPYD WLIGTGDYTY KWEALQQKEA
LARLRALHFG QSGRFGVLDG SGRNLLSPSD RALDGMLIHD MAAPEKAALE KLLAAGERGG
GFVRYQWLNP ENGQLVNKTA LVNVVKPWNW FVVATTFDDD FQSLLGEELR KHEAGHDQRL
LNLLIAIVAA LGLGLLSSLL FSRWSKRLFA DYHQQRLAQE AALRVQADEL KVLSRAIEQS
PVSIVITDTG GCIRYVNPKF EQVTGYTSQQ VLGQNPRILS SGEKSPDEYR ELWRTIKSGQ
TWQGEFHNRR QDGSLFWERA SISPIIDEQG QILHFLAVKE DISEHKQIEE ALRVSEYKMA
TILDSVEAYI YIKGTDYCYQ YANRRVCELF AREMNGIVGH QDTEFFDPAT CANLRRNDRR
VIEQGERVVE EEVNRTVDGQ ITSAFLSIKI PLRDQDGQIY ALCGISTDIT VRKQAEAELE
HYRQHLETLV QSRTVELARA KDAAEAANRA KSSFLANMSH EIRTPMNAIM GLTHLLQKDV
LDSRARERLG KIGESANHLL NVINDILDLS KIEAGRLALE IREFSPEAVL RQTISMLDER
AAAQGLRLTS HLASDVPALL CGDAVRIGQA LLNFVGNAIK FSERGEIALR ARVDRRDGEQ
VMLRFEVQDQ GIGMDAGQQA RLFQSFSQAD DSTTRKYGGT GLGLAINRHL ARMMGGDVGV
DSALGVGSTF WMTVCLAVAT RQPEALAADA AAVAPESQIA RLYGGRRVLL VEDEPINQEV
AAELLSLAGL VVEVAVNGAE AVERVRHGTY ALVLMDMQMP VMGGLEATRL IRQLPGKAVL
PVLAMTANAF DEDRQACLDA GMNDHIGKPV DPDLLYASLL RWLAHG
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