Gene Daro_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0203 
Symbol 
ID3569898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp219250 
End bp219786 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID637678641 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_283432 
Protein GI71905845 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.0358827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAT ATCACGGCAC GACGATCTTG TCGGTGCGCC GGGGCAATTC CGTTGCCATG 
GGCGGCGACG GACAGGTCAC GCTGGGCAAT ATCGTCATCA AGGCCACCGC CAGAAAGGTG
CGTCGCCTCT ACAACGGCCG CATCCTGGCC GGTTTTGCCG GCGGCACGGC CGATGCCTTC
ACGCTGTTCG AGCGTTTCGA GGCCAAGCTG GATAAACATC AGGGCAACCT GCTGCGCTCA
GCCGTCGAAC TGGCCAAGGA CTGGCGTTCT GACCGCGCCC TGCGCCGGCT GGAGGCAATG
CTTTCGGTGG CTGATCGCGA GGTATCGCTG ATCATTACCG GCAACGGTGA TGTGCTGGAG
CCCGAGCAGG GTATCGTCGC CATCGGCTCT GGCGGTTCCT ATGCCCAGAG TGCGGCGCGT
GCCTTGCTGG AAAATACCGA GTTGGCGCCG CGCGACATCG TTACCAAATC ACTGGAAATC
GCTGGCGACA TCTGCATTTA CACCAACCGT AATTTCACGC TGGAGGTGCT GGAATGA
 
Protein sequence
MEQYHGTTIL SVRRGNSVAM GGDGQVTLGN IVIKATARKV RRLYNGRILA GFAGGTADAF 
TLFERFEAKL DKHQGNLLRS AVELAKDWRS DRALRRLEAM LSVADREVSL IITGNGDVLE
PEQGIVAIGS GGSYAQSAAR ALLENTELAP RDIVTKSLEI AGDICIYTNR NFTLEVLE