Gene Daro_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0171 
Symbol 
ID3569499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp185931 
End bp186401 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637678606 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_283400 
Protein GI71905813 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CCGTACTCGC CGTCGGTCAT CGCCAGCCCG ACTGGGTCAA CGAAGGCTGT 
GCCGAGTACC TCAAGCGCAT GCCGCGCGAA CTGGCGGCCA GCGTGACCGA AATCAAGCCT
GAAGCCCGCG GCTCCAAGAC CCGGGAGCAA TTGCTGGCGG CCGAGAAGTC GCGAATTCGC
GATGCCATGG CCGCTGGCAG CCGTCTTGTC GTGCTCGACG AGAAGGGCGA CGACCTGACT
ACGCTGAAAC TGGCCAAGCG GCTGGAAACC TGGATGCAGG ATGGTCGCGA TGTGGCGCTG
CTGATCGGTG GTGCTGACGG GCTGGATGAG GAATTCAAGC AGCAGGCTGA TGACCGGCTG
CGCTTGTCCA GTCTGACGCT GCCGCATGGC ATGGCACGCC TGCTATTATG CGAACAGCTT
TATCGTGCGG TTAGCGTTCT GAAAAATCAT CCTTATCACC GGGAGGGATA A
 
Protein sequence
MKLAVLAVGH RQPDWVNEGC AEYLKRMPRE LAASVTEIKP EARGSKTREQ LLAAEKSRIR 
DAMAAGSRLV VLDEKGDDLT TLKLAKRLET WMQDGRDVAL LIGGADGLDE EFKQQADDRL
RLSSLTLPHG MARLLLCEQL YRAVSVLKNH PYHREG