Gene Daro_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0138 
Symbol 
ID3569544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp152017 
End bp152919 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content62% 
IMG OID637678573 
Productperiplasmic binding protein 
Protein accessionYP_283367 
Protein GI71905780 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC GCATGAAAAT CCGCTTGCTT TCAGCCTTGG CGACCGCCTT CGTCGTTTCC 
ACCAACGCCC ACGCCGACCT CGTCATCAAG GATGACATCG GCCAGGAAAT CCGTCTCAAG
GCCCCGGCCA AACGCATCGT TGCCCTCGCC CCCCACATCG CCGAGAGCCT GTATGCCGCG
GGTGCCGGCG ACCGGCTGGT CGGTACCGTC GAATACAGCG ACTACCCGCC GGAAGCCAAG
AAAGTGCCGC GGGTCGGCGG CTACTCGCGC GTCGACCTTG AGGCCATCGC GGCCCTCAAG
CCTGATCTGG TCCTGGCCTG GGAGAGCGGC AACAACATGC CGCAGGTCGA CAAACTGAAG
GGGCTTGGCC TGACGGTCTA TGTCTCACAG CCAAACAAGA TCGAAAACGT GGCCGACCAG
CTGGTTCGCC TGGGCCAGCT GGCCGGCACC GAGCCCGCCG CCAATGCGGC CGCCGAACGT
TTCCGTAAAC GGCTGGACGG CCTGCGCGCT GCCAACGTCG GCAAGCCGAA AGTACGCGTC
TTTTATCAAA TCTGGAAAAC CCCGCTGATG ACGGTCGGCG GCCCGCAGAT CATCAGCGAT
GCGATCAAGC TATGCGGTGG CGACAATATA TTCGGCCACC TCGCCAAGAT GGCGCCAACG
GTCAGTGTTG AAGCCGTGCT CGAAGCCGAC CCCGAGGCCA TCATTGCCAC CGGCATGGGC
GACGCCAAGC CGGAATGGCT GCACGACTGG GATAAATGGA CACGGATGAC GGCGGTCAAA
CGCGACAACC TGTTCCACAT CAATCCGGAC ATCATGCAGC GCCATACGCC GCGCATCCTG
GACGGCACCG AGAAACTTTG CGCCCACCTC GATGTCGCAA GAAGCCACCG CCCCGCCAAA
TAA
 
Protein sequence
METRMKIRLL SALATAFVVS TNAHADLVIK DDIGQEIRLK APAKRIVALA PHIAESLYAA 
GAGDRLVGTV EYSDYPPEAK KVPRVGGYSR VDLEAIAALK PDLVLAWESG NNMPQVDKLK
GLGLTVYVSQ PNKIENVADQ LVRLGQLAGT EPAANAAAER FRKRLDGLRA ANVGKPKVRV
FYQIWKTPLM TVGGPQIISD AIKLCGGDNI FGHLAKMAPT VSVEAVLEAD PEAIIATGMG
DAKPEWLHDW DKWTRMTAVK RDNLFHINPD IMQRHTPRIL DGTEKLCAHL DVARSHRPAK