Gene Daro_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0134 
Symbol 
ID3569540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp149280 
End bp150185 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID637678569 
Producthypothetical protein 
Protein accessionYP_283363 
Protein GI71905776 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.9202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGGT TGCCCCGCTT TATCCTGATT TTACTGATTG CCCTTGCCAC GCCGGCTTGG 
GGCGGCAGCA TTGCGCTCGT TCTCAGCGAA AATGGCGGCA TGTATGGCGA ATTCGCCAAC
ACCCTTGATG AGTCGCTGAG CGGTACTGCC TGGAATATTG TCTCCACCAG CGCCGGTGAT
TCGCCAGCAA CGGCAGCCAG ACCACCCGAT CTGGTCGTCA CGGTCGGCAG CGAAGCGCTG
CGCCGGACAT TGAGCCGCGG CGAGAGCACC CCGATCATCG CGACCCTGTT GCCGCGGCAG
ACTTACGAAA AAATCCTGAC CGAGCATCGG CGGACTTCCG GGCGCATCAC CGCCATCTAT
CTCGACCAAC CCGCCAACCG CCAGGCCGTT TTCTTGCGCC ATCTCCTGCC GGATCAGAAG
CGATTCGGCA TACTTTTCAG CAGTGAAACA AGAAACTCGG CCAGCCAGTA CCGCCAGGCA
TTCGCGTGGG CCGGCCTGGT GCTGGACAGC GAGGACAGCG ATACCGAAAA GACACTCCTG
CCGGCCCTGA ATGCCCTGCT CACGAGAAGC GGCGCCCTGG TCGCGCTTCC CGATGCCAGC
ATCTACCATC GCAACAATAT CAAGGCCATT CTGATCACCG CGTTCCGCCT CCAGCGACCG
GTTATCGGCT ACTCCACGGC CTTTGTCACG GCCGGTGCGC TGGCCGCACT GCACAGTACC
CCGAGCCAGA TAGCCCGCCA GACGGCGGAC ATGATCGTCA ATAGCGGCAC CAACCTGACG
CCCCCGACCG GGCCGACCCA GTTTGCCATT GCCATCAATC CAAATGTTGC ACAGGCACTG
GGACTCAACA TTCCCGATGA AGCGTCGCTA CGACGCGCCA TCCTTGCTGA CAGGGATGCA
CGATGA
 
Protein sequence
MLRLPRFILI LLIALATPAW GGSIALVLSE NGGMYGEFAN TLDESLSGTA WNIVSTSAGD 
SPATAARPPD LVVTVGSEAL RRTLSRGEST PIIATLLPRQ TYEKILTEHR RTSGRITAIY
LDQPANRQAV FLRHLLPDQK RFGILFSSET RNSASQYRQA FAWAGLVLDS EDSDTEKTLL
PALNALLTRS GALVALPDAS IYHRNNIKAI LITAFRLQRP VIGYSTAFVT AGALAALHST
PSQIARQTAD MIVNSGTNLT PPTGPTQFAI AINPNVAQAL GLNIPDEASL RRAILADRDA
R