| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0123 |
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| Symbol | |
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| ID | 3569968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 139128 |
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| End bp | 139907 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637678558 |
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| Product | AP endonuclease |
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| Protein accession | YP_283352 |
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| Protein GI | 71905765 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 84 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACGCA TCATCTCCCT GAATCTCAAT GGTATCCGCT CCGCATGGAG TAAAAATGTC
TTGCCGTGGG TAGCGGCTCA GAACGCGGAC GTCATTTGTC TGCAGGAACT GAAGGCCCAG
TTACCCGACC TGACGCCAGA AATGATGGCC CCGGATGGCA TGCAGGCTTT CTATCACTGT
GCCGAAAAGA AGGGTTACAG CGGCGTTGGT ATCTGGAGTA GGGAAAAACC GGATCGGGTG
ATCGAAGGCT TCGATGGCGG TGAATTCGAT GCCGAGGGGC GCTACATCCG AGCCGATTTT
GGCAATTTGT CGGTGATTTC TCTTTATCTG CCTTCGGGGT CCTCTTCGCC CGAGCGCCAG
GAGGCAAAGT TTCGCTTTCT CGATGTCTTC TTCCCGCAGA TGCTGGCGTT GCGTGCCGAA
GGCCGTGAAA TCGTGCTGTG TGGTGACTGG AATATCGCCC ATCAGGCCAT CGATCTGAAA
AACTGGAAAT CAAACCAGAA AAACTCCGGT TTCTTGCCTG AAGAACGTGC CTGGTTGTCC
CGGCTGTTCG AGGAGCAGGG CTGGGTTGAT GTTTATCGCC GCCTGCACCC CGAAACCACG
GATGCCTGCT ACACGTGGTG GAGCAATCGC GGCCAGGCCT GGGCCAAGAA CGTCGGTTGG
CGAATCGACT ACCAGATCGC TACCCCGGGT ATCGCAGTAA TGGCAGTGCA GGCCGAGGTC
TACAAGGACG AGCGATTTTC CGATCATGCC CCGCTGATCA TCGATTACGA CTTCAAATAA
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| Protein sequence | MLRIISLNLN GIRSAWSKNV LPWVAAQNAD VICLQELKAQ LPDLTPEMMA PDGMQAFYHC
AEKKGYSGVG IWSREKPDRV IEGFDGGEFD AEGRYIRADF GNLSVISLYL PSGSSSPERQ
EAKFRFLDVF FPQMLALRAE GREIVLCGDW NIAHQAIDLK NWKSNQKNSG FLPEERAWLS
RLFEEQGWVD VYRRLHPETT DACYTWWSNR GQAWAKNVGW RIDYQIATPG IAVMAVQAEV
YKDERFSDHA PLIIDYDFK
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