| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0120 |
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| Symbol | gatB |
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| ID | 3569965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 136344 |
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| End bp | 137798 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637678555 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_283349 |
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| Protein GI | 71905762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 78 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGT GGGAAGTGGT AATCGGCATC GAGACGCATG CGCAGCTCTC GACGGTTTCG
AAGATTTTTT CCGGCGCCTC GACGGCGTTT GGTGCCGAAC CGAATACCCA GGCTTGCGCG
GTTGATCTCG CGCTGCCCGG CGTTCTTCCA GTGTTGAACA AGAAAGCAGT CGAGTGCGCC
ATCCGCTTTG GCTTGGCGAT TGGTGCCGAG GTGGCGCAGA AGTCCGTTTT TGCCCGCAAA
AACTACTTTT ATCCGGATCT GCCCAAGGGC TACCAGATCA GCCAGATGGA CCTGCCGGTG
GTGGTTGGCG GCAACATCAC GCTGCAGGTC GGGCAGGGCG ACAAGGCATA CGAAAAAATC
GTTCGTCTGA CCCGTGCCCA TCTTGAAGAA GATGCCGGCA AGTCGCTGCA TGAAGATTTT
CATGGCAAGT CGGGTATCGA CCTGAATCGG GCTGGTACGC CATTGCTCGA AATCGTTTCC
GAACCGGACA TGCGTTCGTC CGACGAAGCG GTCGCCTATG CCCGGGCATT GCATGCGCTG
GTCCGCTGGA TCGGCATCTG CGACGGAAAC ATGCAGGAAG GCTCCTTCCG CTGTGACGCC
AATGTTTCGG TGCGCCCGAA AGGCCAGGCC GAATTTGGCA CTCGCCGCGA GATCAAGAAT
CTCAACTCCT TCCGGTTCAT GAAGGAAGCC ATCGATTTCG AAGTCCAGTG GCAAATCAAT
GAAATCGAGG AAGGCCGCAA GATTCAGCAG GCCACAGTGC TGTTCGACCC GGATACCGGC
GAGACGCGCA TGATGCGGAG CAAGGAAGAC GCGCACGATT ACCGCTACTT CCCAGACCCC
GATCTATTGC CGTTGATGAT TCCGGCCGAA TGGATCGCCC GCGTTCAAGG TGAAATGCCA
GAGTTGCCAG TGCAGAGACG CGAGCGTTTT GCCGGCGACT TGGGTCTTTC CGCCTACGAT
GCCAGCGCGC TGACGGCAAG TCAGGAAATT GCCGATTATT TCGAGGCTGT CGTCGCGATT
GCCGGCAAGG CCAATGCGAA GCCCTGTGCC AACTGGGTGA TGGTCGATCT GGCGGCCCGT
CTCAACAAGG ATGGCAAGGA TATTGCCGAT TCGCCGGTTT CAGCGGCTCA ACTGGCCGGT
CTGATCCAGC GGATTGCCGA TAGCACCATT TCCAACAACA TCGCCAAGAA GGTTTTCGAA
GCCTTGTGGA ATGGCGAAGG GGCGACGGCA GATGAGGTCA TCGACAAGCA AGGCTTGAAG
CAGATTACCG ATACTGGCGC CATCGAAGCT TTGGTGGACG AAGTGCTCGC TGCCAATGCT
GCCAACGTGG CTGAATTCAA GGCTGGCAAG GAAAAGGCGT TCAATGCGCT GGTTGGCCAA
GTGATGAAAG CAGCCAAGGG CAAGGCCAAC CCGCAGCAGG TCAATGACCT GCTGAAGCAG
AAACTGGCGG GTTAA
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| Protein sequence | MTQWEVVIGI ETHAQLSTVS KIFSGASTAF GAEPNTQACA VDLALPGVLP VLNKKAVECA
IRFGLAIGAE VAQKSVFARK NYFYPDLPKG YQISQMDLPV VVGGNITLQV GQGDKAYEKI
VRLTRAHLEE DAGKSLHEDF HGKSGIDLNR AGTPLLEIVS EPDMRSSDEA VAYARALHAL
VRWIGICDGN MQEGSFRCDA NVSVRPKGQA EFGTRREIKN LNSFRFMKEA IDFEVQWQIN
EIEEGRKIQQ ATVLFDPDTG ETRMMRSKED AHDYRYFPDP DLLPLMIPAE WIARVQGEMP
ELPVQRRERF AGDLGLSAYD ASALTASQEI ADYFEAVVAI AGKANAKPCA NWVMVDLAAR
LNKDGKDIAD SPVSAAQLAG LIQRIADSTI SNNIAKKVFE ALWNGEGATA DEVIDKQGLK
QITDTGAIEA LVDEVLAANA ANVAEFKAGK EKAFNALVGQ VMKAAKGKAN PQQVNDLLKQ
KLAG
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