| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0087 |
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| Symbol | |
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| ID | 3569726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 103668 |
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| End bp | 104351 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637678522 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_283316 |
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| Protein GI | 71905729 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC AAAGCCTAGT CGGCAAGCGA GTGCTCATTA CCCAGGCCGA TATGTTCATG
GGGCCAGTGC TCTGCGAGGT ATTTGCCCGG CATGGCGCAA CGGTCATTGC CAATACGGAT
GCTCTGCTTG CGCCTGATGC CCCGGCCACC GTGGTCGCAC AAGCAGGTCA GATTGATGCG
CTGGTCGCCA ATCTGGCCAT GCCGGCACCG ACGACAGCAG CCACGGAAGT CTCGGATGAG
GAATGGCGTG ACACCTTCGC CATCCTCGTC GATCCGCTGG CCCGATTGCT CCGTGCGGCC
CTGCCAGCCA TGATAGAGCG GCGGTCTGGC AAGATTCTGG TGATGGGCAG CGCGTCGGCC
CTGCGCGGGA TGAAGCGTGC GTCCACCTAC AGCGCTGCAC GCGGCGCCCA GCTGGCCTAC
GTTCAGGCGG TCGGTGTGGA AGTCGCGCCG CACAACGTTC AGGTCAATGC CATTGCGCAG
AATTTCGTCG ATAACCCGAC TTATTTCCCG CCCGAAGTTC AGGCCAACCC GCGCTTCCAG
GAGCGCCTGA AGCGTGAGGT TCCGCTCGGG CGTCTGGTCG GCGCCGATGA AGATGCCGAG
TTTGCGGCTT ATCTGTGCAG CGATTCGGCG AATTGTTTTG TCGGGCAGGT CTTTCCGGTT
TGCGGCGGCT GGGTGATGCG CTAG
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| Protein sequence | MSNQSLVGKR VLITQADMFM GPVLCEVFAR HGATVIANTD ALLAPDAPAT VVAQAGQIDA
LVANLAMPAP TTAATEVSDE EWRDTFAILV DPLARLLRAA LPAMIERRSG KILVMGSASA
LRGMKRASTY SAARGAQLAY VQAVGVEVAP HNVQVNAIAQ NFVDNPTYFP PEVQANPRFQ
ERLKREVPLG RLVGADEDAE FAAYLCSDSA NCFVGQVFPV CGGWVMR
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