Gene Daro_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0076 
Symbol 
ID3569715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp94027 
End bp94482 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID637678511 
ProductCopG family transcriptional regulator 
Protein accessionYP_283305 
Protein GI71905718 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG AGGATAAGAA TACATCCGTC AGTCGCATCA GCATCTCGCT GCCCCCCGCC 
CTGCTCGACG AGCTGGACAC GATGGTGGCG AGCCGCGGCT ATGGCAGCCG CTCCCAGGCC
ATCGCTGACA TGGTTCATTA CCAGTTGGCC GAGCACAAGC GCAAGCTGGG CAACGACGTC
ATGGTCGGCA CCATCACCCT GCTCTACGAC CGCTCGACAC GCGGTCTGCA AAAGGGCCTG
TCCGACATCC AGTTCAAGTA CATCGACGAA GTGATCAGTT CGCTGCACGT GCACCTCAGC
CACGACCAGG TGATGGAAGT GATCCTCGTC CAGGGCCATG CCCACGATAT CCAGGAAATC
GCCAACGAAC TGATCACCCA GCGCGGCGTG ATCACCGGCC AGCTGCAGTT GATGGCGGCC
GTCATTCCGC CGCTGCAGGC CCCGGGCGAT TTATAG
 
Protein sequence
MADEDKNTSV SRISISLPPA LLDELDTMVA SRGYGSRSQA IADMVHYQLA EHKRKLGNDV 
MVGTITLLYD RSTRGLQKGL SDIQFKYIDE VISSLHVHLS HDQVMEVILV QGHAHDIQEI
ANELITQRGV ITGQLQLMAA VIPPLQAPGD L