| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0053 |
|---|
| Symbol | |
|---|
| ID | 3567815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 62549 |
|---|
| End bp | 62887 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637678482 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_283282 |
|---|
| Protein GI | 71905695 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.0041295 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.377674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG TTACCGCCAT CATCAAGCCG TTCAAGCTTG ACGAAGTGCG TGAAGCGTTG
TCCGCCATCG GCGTGCAAGG CATCACGGTC ACTGAAGTGA AGGGTTTCGG CCGGCAGAAA
GGGCATACCG AGCTGTATCG GGGCGCCGAA TATGTCGTCG ATTTCCTGCC CAAGGTCAAG
ATCGAAGCCG CTGTCAGGGA CGATCAGCTC GATCAGGTCA TCGAAGCCAT CGAAAAGTCG
GCATCCACCG GCAAGATCGG CGACGGCAAG ATCTTCGTGT TCGATGTCGA ACAAGTCATT
CGTATCCGGA CCGGTGAAAC CGGTACCGAT GCCCTCTAA
|
|---|
| Protein sequence | MKFVTAIIKP FKLDEVREAL SAIGVQGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK
IEAAVRDDQL DQVIEAIEKS ASTGKIGDGK IFVFDVEQVI RIRTGETGTD AL
|
|---|
| |