| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0046 |
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| Symbol | metH |
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| ID | 3567808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 53692 |
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| End bp | 57354 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637678475 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_283275 |
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| Protein GI | 71905688 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.61869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAA ACCGTACCGC CGAACTCTCT TCCCTGCTCC AGCAACGCCT GCTCGTCCTC
GATGGCGCCA TGGGCACCAT GATCCAGCGG CACGGCCTGC AGGAAGCTGA TTACCGGGGT
GAGCGCTTCA AGGATCACCC CCACGACCTG AAGGGCAATA ACGACCTGCT GGTCCTGACC
CGGCCAGACA TTATCGGCGG CATCCACCGC GAATATCTGG AAGCCGGCGC CGACATTCTC
GAGACCTGCA CCTTCAACTC GACCGCGGTA TCGCAGGCCG ACTACAACCT GTCGGAACTC
GTCTACGAAC TGAATTTCGA AGGCGCCAAG CTGGCCCGTC AGTTGTGCGA CGAATTCACC
GCCGCCAATC CGGCCAAGCC GCGCTTCGTC GCCGGCGTGC TTGGCCCGAC CAGCCGTACC
GCCTCGATCT CGCCGGACGT CAATGATCCG GGCTACCGCA ACGTCACGTT CGACGAACTG
GTCGCCAACT ACGTCGAGGC CATCACCGGT TTGGTCGAAG GCGGCGCCGA CATCCTGCTC
GTTGAAACGG TGTTCGACAC GCTGAATGCC AAGGCCGCGC TATTTGCCAT CGAGAAGTTT
TTCGACATCG CCCAGCGTCG CTGGCCGGTG ATGATCTCCG GCACGATTAC CGACGCTTCC
GGCCGCACGC TATCCGGCCA GACCGCTGAG GCCTTCTGGA ATTCGCTGCG CCACGTCCAG
CCGGTCAGTT TCGGCCTGAA CTGCGCACTC GGCGCCAAGG AACTGCGCCA GTACGTCGAG
GAACTGTCCC GCGTCTGCGA CTGCTACGTC TCGGCCCACC CGAACGCCGG CCTGCCCAAT
GCCTTTGGCG GCTACGACGA AACGGCCGAC ATGCTGGCCG ACGAAATCGA AAGCTGGGCA
AAGGCCGGCA TCGTCAATAT TGTCGGCGGC TGCTGTGGCA CCTCGCCGGA GCACATCGCT
GCCATCGCCC AACGTGTTGC GACGGTCAGC CCGCGCCAGC GCCCCGCCAT CGAACCGGCG
CTGCGCCTGT CCGGTCTCGA AGCCTTCAAC GTCACACCCG GCTCGCTCTA CGTGAACGTC
GGCGAACGGA CCAACGTCAC CGGCTCCAAG GCCTTCGCGC GCATGATCCT CGAAGGCCGT
TTCGACGATG CGCTGGCCGT TGCCCGCCAA CAGGTCGAGA ACGGCGCCCA GATCATCGAC
ATCAACATGG ACGAGGCGAT GCTCGATTCG CTGGCCGCCA TGGACAAATT CCTCAAACTG
ATCGCCTCCG AGCCGGACAT TTCGCGCGTG CCGATCATGA TCGACTCGTC GAAATGGGAG
GTCATCGAAG CGGGCCTGAA GTGCATCCAG GGCAAGGGCA TCGTCAATTC GATCTCGATG
AAGGAAGGCG AAGCCAAGTT CATCGAGCAG GCCAAGCTGG CCCGCCGCTA CGGTGCGGCG
GTCATTGTCA TGGCTTTCGA CGAGAAGGGC CAGGCCGACA CGTTTGCCCG CAAGACCGAG
ATTTCCAAGC GCGCCTACGA CCTGCTGCTG AGCATCGGCT TCCCGGCTGA AGACATCATC
TTCGACCCGA ACATTTTCGC CATCGCCACC GGTATCCCGG AACACGACAA CTACGCGGTC
GATTTCATCG AATCGGTGCG CTGGATCAAG CAGAACCTGC CGCACGCCCA CATCTCCGGT
GGCGTATCCA ACGTCTCGTT CAGCTTCCGC GGCAACGACC CGGTGCGTGA GGCGATCCAC
ACCGTCTTCC TCTACCACGC GATCAAGAAC GGCATGACCA TGGGCATCGT CAATGCCGGC
ATGCTTGGCA TCTACGACGA TCTGGAACCG GAATTGCGCC AGAAGGTCGA GGATGTGGTG
CTCAACCGCA ACCCGAATGC GGGCGAGGCG CTGGTCGATT TCGCCCAGAC GGTCAAGGAA
GGCAAAGCCA AGGACACCGG ACCGGACCTC AGCTGGCGTG AGCAGAGCGT TGAGAAGCGC
CTCGAACATG CCCTGATCAA GGGCATCACC GATTTCGTCG TGGCGGATAC CGAGGAAGTC
CGCGCCCAGC TCGAAGCTGA AGGCAAGCCA CCGCTCGCCG TCATCGAAGG CCCGCTGATG
GCCGGCATGA ACCATGTTGG CGACCTGTTC GGCGCCGGCA AGATGTTCCT GCCGCAGGTG
GTCAAATCGG CCCGCGTGAT GAAACAGGCG GTCGCCCACC TACTGCCCTA CATCGAAGCG
GAAAAGACCC GCACCGGCCT GGGCAGCAAG GGCAAGATAC TGATGGCGAC GGTCAAGGGC
GACGTGCACG ACATCGGCAA GAACATCGTC GGCGTCGTGC TCGGCTGCAA CGGCTACGAC
GTGATCGACC TCGGCGTCAT GGTCTCCTGT GACAACATCC TGAAGGCGGC GCTCGAACAC
CGCGTCGACA TCATCGGCCT GTCCGGCCTG ATCACCCCGT CGCTTGAGGA AATGGCCCAC
GTCGCCAGCG AAATGCAGCG CCAAGGCATG AAGCAGCCGC TGCTGATCGG TGGCGCGACG
ACCAGCCGCG CCCACACCGC GATCAAGATC GCCCCCAACA CCGAAGGCGC TGTCGTCTAC
GTGCCAGACG CCTCGCGCGC CGTTGGCGTC GCCACCAAGC TGCTCTCCAC CGAGCAGCGC
GATGGTTATA TGGCTGAAAT CGTCGCCGAA TACGAGGCTG TTCGCGCCGA ACACTCAGGC
CGCAAGGGCG CGACGATGGT TACGCTGGCT GAAGCCCGCG CCAACCGTTT CACGTGGAAC
GAGCCGTTCA CACCGGCCAA GCCGAAACAG CTCGGCCTGC AGACGCTCAA CCCGAGCCTG
AGCGATCTGG CGCTACTGAT CGACTGGACA CCGTTCTTCC AAAGCTGGGA TCTGGCCGGT
CGCTATCCAG CCATTCTCGA CAACGAAACG GTCGGCGAAA CCGCTCGCCA GTTGTTCACC
GATGCCAAGG AAATGCTCGG CAAGATCATC AGCGAAAACT GGCTGAGCGC CCGTGCCGTC
TTCGGCCTTT ACCCGGCCAA GGCAGAGAAC GAAGACATCA TCATCTACAG CGATGAAAGC
CGGACGACTG AACTGACCCG CTGGGTGGGC CTACGTCAAC AACACAAGCA ACCAAAAGGT
CGCTTCAACA TGGCGCTGGC TGATTTTATT GGTGAAAACG ATTATGTCGG CGCCTTTGCC
GTCACCGCCG GCCACCGCAT CGAAGAGCGT GTCGCTGCAT TTGAAGCCGC CCACGACGAC
TACTCCGCGA TCATGCTCAA GTCGCTGGCC GACCGTCTGG CCGAAGCCGC CGCTGAATGG
CTGCATCTGC AAGTACGTAC CCAATACTGG GGCTACGCCC ACGATGAAAC CTTCACCAAT
GCCGAACTGA TTGCCGAACA ATACAAAGGT ATCCGCCCCG CCCCCGGCTA CCCGGCTTGT
CCAGACCACA CCGCCAAGCG CGAGTTGTTC GCCCTGCTCG ATGCCCCGGC CAACGCCGGC
ATGCAGCTGA CCGAGTCCTG CGCGATGACC CCGGCTGCGG CAGTATCCGG CTTCTACATT
GCTCACCCGG CAGCGGCCTA TTTCGCCATT CCGAAAATCG GGCGCGATCA ACTGGAAGAT
TGGGCTGCCC GCAAAGGCAT GTCACTCAAG GATGCCGAGT ACTGGCTGGC ACCCTTGCTG
TAA
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| Protein sequence | MQPNRTAELS SLLQQRLLVL DGAMGTMIQR HGLQEADYRG ERFKDHPHDL KGNNDLLVLT
RPDIIGGIHR EYLEAGADIL ETCTFNSTAV SQADYNLSEL VYELNFEGAK LARQLCDEFT
AANPAKPRFV AGVLGPTSRT ASISPDVNDP GYRNVTFDEL VANYVEAITG LVEGGADILL
VETVFDTLNA KAALFAIEKF FDIAQRRWPV MISGTITDAS GRTLSGQTAE AFWNSLRHVQ
PVSFGLNCAL GAKELRQYVE ELSRVCDCYV SAHPNAGLPN AFGGYDETAD MLADEIESWA
KAGIVNIVGG CCGTSPEHIA AIAQRVATVS PRQRPAIEPA LRLSGLEAFN VTPGSLYVNV
GERTNVTGSK AFARMILEGR FDDALAVARQ QVENGAQIID INMDEAMLDS LAAMDKFLKL
IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISM KEGEAKFIEQ AKLARRYGAA
VIVMAFDEKG QADTFARKTE ISKRAYDLLL SIGFPAEDII FDPNIFAIAT GIPEHDNYAV
DFIESVRWIK QNLPHAHISG GVSNVSFSFR GNDPVREAIH TVFLYHAIKN GMTMGIVNAG
MLGIYDDLEP ELRQKVEDVV LNRNPNAGEA LVDFAQTVKE GKAKDTGPDL SWREQSVEKR
LEHALIKGIT DFVVADTEEV RAQLEAEGKP PLAVIEGPLM AGMNHVGDLF GAGKMFLPQV
VKSARVMKQA VAHLLPYIEA EKTRTGLGSK GKILMATVKG DVHDIGKNIV GVVLGCNGYD
VIDLGVMVSC DNILKAALEH RVDIIGLSGL ITPSLEEMAH VASEMQRQGM KQPLLIGGAT
TSRAHTAIKI APNTEGAVVY VPDASRAVGV ATKLLSTEQR DGYMAEIVAE YEAVRAEHSG
RKGATMVTLA EARANRFTWN EPFTPAKPKQ LGLQTLNPSL SDLALLIDWT PFFQSWDLAG
RYPAILDNET VGETARQLFT DAKEMLGKII SENWLSARAV FGLYPAKAEN EDIIIYSDES
RTTELTRWVG LRQQHKQPKG RFNMALADFI GENDYVGAFA VTAGHRIEER VAAFEAAHDD
YSAIMLKSLA DRLAEAAAEW LHLQVRTQYW GYAHDETFTN AELIAEQYKG IRPAPGYPAC
PDHTAKRELF ALLDAPANAG MQLTESCAMT PAAAVSGFYI AHPAAAYFAI PKIGRDQLED
WAARKGMSLK DAEYWLAPLL
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