Gene Daro_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0035 
Symbol 
ID3567797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp41511 
End bp42728 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID637678464 
Productmajor facilitator transporter 
Protein accessionYP_283264 
Protein GI71905677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.55843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCACC CCGACACCCG AAGCCTGTGG ATCAGGCTAT TCCTGCCTTT TGCCGCCGGC 
TACTTCCTCT CCTACCTGTT CCGCACCGTC AACGCGATCA TCGGACCGGT TCTGGCGCGC
GAACTTGGCC TTGGCGACAA CGCGCTCGGC TTGCTGACCA GCACCTACTT TCTGGCCTTC
GGCCTGGCGC AGTTGCCGCT CGGCATGCTG CTCGACCGCT TCGGGCCCCG TCGGGTCGAA
GCCGGTCTGC TGGTCATCGC CGCCAGTGGT GCTGCCGTAT TTTCAATATC GGATGGGCTG
GGCGGGCTGG CCATCGGCCG GGCGCTGATC GGCCTAGGTG TTTCAGCCTG TCTGATGGCC
TCGTTCAAAG CCTTTTCACA ATGGTTCCCC CCTGAGCGCC AAGCCTCGCT GACCGGCTGG
GTCATGGCCT CCGGCGGCTT GGGCGCGCTG GCTGCGACCA AGCCTCTGGA AATGCTGCTG
GGGTTTACCG GCTGGCGGGA AATCGCCTTT GCGCTCGCTG TGGTTACCCT GATCGTTGCG
GGCATCCTGT GGCTGAAAGT ACCGGACAAG GCCACGGAAC AGAAGGGCGC CGGCCTTGCC
GAGCAGTTGG CGGGAGTCCG GACTATTTTT GCCAGCCGCC ACTTCTGGCG CTATGCCCCG
ATGGGCTTCT TCTTCACCGG AGGCTTCTTG GCGGTGCAGG GCTTATGGGT CTCGCGCTGG
ATGACAGTGC TGGAAGGCAT GGAACACACA GCCATTGCCA CCCGCCTGAC CTGGATCAGC
GGCGCCATGC TGGCTGGCTT CCTGTTCATG GGCTTTTTCG CCACCACCCT CGTTCGACAT
GGATTGAAAC TGGAACGAAT TTATCTCGGC GCGATGAGCA TAGCACTGGC CTGCTTTGCA
CTGATCAGCA GCCTGCCAAC CGTCGCCGGT AATCTGTTTT GGCCGATACT CGGTATCTGT
TTTTCGCTGT CCAATATTTC CTACTCGCTG GTTAGCCAGG CATTTCCACC CGCCGTCTCC
GGTCGGGCCA ACACCGCGCT CAATCTGCTG GTCTTCGCCG GGGCCTTTGG CCTGCAATGG
GGCATCGGCA GTTCCGTCGA TGCCCTCCAG GCCAATGGCT GGGCTGGCGA TACGGCCTAC
CGTAGCGCCT TCTTTGCGCT GCTAGGCGGC CAGACTCTGG CCCTCGGCTG GCTTCTGCTG
TCCGCCCGGC GCAACTGA
 
Protein sequence
MTHPDTRSLW IRLFLPFAAG YFLSYLFRTV NAIIGPVLAR ELGLGDNALG LLTSTYFLAF 
GLAQLPLGML LDRFGPRRVE AGLLVIAASG AAVFSISDGL GGLAIGRALI GLGVSACLMA
SFKAFSQWFP PERQASLTGW VMASGGLGAL AATKPLEMLL GFTGWREIAF ALAVVTLIVA
GILWLKVPDK ATEQKGAGLA EQLAGVRTIF ASRHFWRYAP MGFFFTGGFL AVQGLWVSRW
MTVLEGMEHT AIATRLTWIS GAMLAGFLFM GFFATTLVRH GLKLERIYLG AMSIALACFA
LISSLPTVAG NLFWPILGIC FSLSNISYSL VSQAFPPAVS GRANTALNLL VFAGAFGLQW
GIGSSVDALQ ANGWAGDTAY RSAFFALLGG QTLALGWLLL SARRN