Gene Daro_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0023 
Symbol 
ID3567785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp28557 
End bp29399 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID637678452 
ProductM48 family peptidase 
Protein accessionYP_283252 
Protein GI71905665 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.404205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACT GGATGAAGAC TGCCATTCTG ATGGCCGCCA TCATGGCGCT GTTCGGTATT 
GTTGGCGGCA TGATCGGCGG CAAGTCCGGC ATGCTGATGG CGCTGGTCTT CGGTGGTGCG
ATGAATCTGT TCTCGTACTG GTTCTCCGAC ACCATGGTGC TGAAGATGTA CAACGCCCAG
CCGGTGGACG AGACCAGTGC GCCGCAGTTC TATGCGATGG TGCGCGAACT GGCTCAGCGG
GCCGGGCTAC CGATGCCCAA GGTGTACATC ATCAATGAAG CCCAGCCCAA TGCCTTTGCC
ACCGGCCGCA ACCCGGAGCA TGCGGCGGTG GCGGCAACGA CCGGCATTAT CCAGTTGCTG
TCGGCCCGCG AGCTGCGTGG GGTCATGGCG CATGAACTGG CTCACGTGAA GCATCGTGAC
ATCCTGATCT CGACCATCTC GGCGACCATG GCCGGGGCCA TTTCGGCACT GGCCAATTTT
GCGATGTTCT TCGGCGGGCG GGACGAAAAC GGTCGTTCGG TAAATCCGCT GGTTGGCATT
CTGGTGGCAA TTCTGGCGCC GCTGGCCGCC AGCCTGATCC AGATGGCGAT TTCCCGGGCT
CGCGAATTCG AGGCTGATCA AGGTGGGGCG GAAATCAGCG GTACGCCGAA TGCGCTCGCC
GATGCGCTGG GCAAGATCCA GATGTATGCC GAAGGCCGCA TTCCGATGGC GCCGGCCGAG
GCGCATCCGG AAACGGCGCA GATGATGATC CTGAACCCGC TCTCCGCTGG CGGTATTCGT
GGACTGTTCT CGACTCATCC GCCGACCGAG GAGCGCATTG CCCGGTTGCG GGCCATGTCC
TGA
 
Protein sequence
MFNWMKTAIL MAAIMALFGI VGGMIGGKSG MLMALVFGGA MNLFSYWFSD TMVLKMYNAQ 
PVDETSAPQF YAMVRELAQR AGLPMPKVYI INEAQPNAFA TGRNPEHAAV AATTGIIQLL
SARELRGVMA HELAHVKHRD ILISTISATM AGAISALANF AMFFGGRDEN GRSVNPLVGI
LVAILAPLAA SLIQMAISRA REFEADQGGA EISGTPNALA DALGKIQMYA EGRIPMAPAE
AHPETAQMMI LNPLSAGGIR GLFSTHPPTE ERIARLRAMS