| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0018 |
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| Symbol | |
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| ID | 3570042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 22231 |
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| End bp | 24750 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637678447 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_283247 |
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| Protein GI | 161377478 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.143927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA AGCTGATCAT TGCCGAAAAA CCTTCCGTCG CCGCCGACAT CGCTCGGGCG
CTGGGGGGCT TCACCAAACA CGACGATTAC TTCGAAAGCG AAGAGCTCGT GCTCTCCTCG
GCCGTCGGTC ACCTGCTGGA ACTGGCCTGC CCCGAAGAGT TCGAGGTCAA GCGCGGCAAA
TGGTCCTTCG CCCACCTTCC GGTCATTCCG CCACACTTCG CCCTGAAGCC GATCGAAAAG
ACGGAATCGC GCCTCAAGGT GCTCAACAAG CTGATCAAAC GCAAGGACGT TACCGGCCTG
ATCAATGCCT GTGACGCGGG GCGTGAAGGC GAGTTGATCT TCAATTACAT CGCCCAGAAC
GCCAAGTCCG GCAAGCCGGT CCAACGCCTG TGGCTGCAGT CGATGACCCA GGGCGCCATC
CGCGACGGCT TCTCCCGCCT GCGTCCCGGG CAGGAAATGG AAGGCCTGGG CGATGCCGCC
GTCTGCCGCT CCGAATCCGA CTGGCTGGTT GGCATCAACG GCACGCGGGC GATGACTGCC
TTCAACTCGA AGACCGGCGG CTTCCACCTG ACCACCGTTG GTCGCGTGCA AACCCCAACG
CTGGCCATCG TTGTCGAGCG TGAACGCAAG ATTCGCGACT TCAAATCACG CGACTACTGG
GAAGTCGAAG CCGATTTCAC GGCCAAGGCC GGCTCCTACA AGGGCAAATG GTTCGACGAA
GCCTTCAAGG GCAAAAACGA CGACGAACAT GCCCGCGCCG ACCGCCTGTG GGAAGTTGCC
CGCGCCGAAG CCATCCGCGC CGCCACTGAA GGCAAGCCCG GTGAAGTGAC CGAAGAAGCC
AAGCCGGAAA CCCGTTTGTC GCCGGCGCTC TTCGATCTGA CCACCCTGCA GCGCGAAGCA
AACGCTCGCT TCGGCTTCTC GGCCAAGACC ACGCTATCGC TGGCCCAGGC CCTGTACGAA
AAACACAAGG TTCTGACCTA TCCACGAACC GACTCCCGCT GCCTGCCAGA AGACTACCTG
CCAACCGTCA AGGAAACCTT GACCATCCTG ACCGGCGAAG GTGCCGGCAA GGGGCACGAC
GAAGTTCTGC TCGCCCGCTA TTCACCGTTT GCCCACCAGA TCCTGGCGCG CAACTGGGTG
CTACCCAACA AGCGCATCTT CAATAACGCC AAGATCAGCG ATCACTTCGC CATCATCCCG
ACGCCGCAGG CGCCCAAGAG CCTGAACGAA ATGGAACAGA AGCTGTACGA CTTCGTCGTT
CGCCGCTTCC TGTCCGTCTT CTTCCCGGCC GCCGAATACA TGGTCACCAC CCGTATCACC
CGGGTCGAAG GCCACCCCTT CAAGACTGAG GGCAAGGTGC TGGTCAATCC GGGCTGGCTC
GCCGTCTACG GCAAGGAAGG CCAGGACGGC GACGAAGGTA ATCTGGTTGC CGTCGATGCC
AAGGAAAAGG TCAAGACCGA CGAAGTCACC GTCAAGGCCA ACGCCACCAA GCCGCCACCA
CGCTACTCGG AAGCCACCCT GCTCTCCGCC ATGGAAGGTG CCGGCAAGAT GGTCGACGAC
GAAGAACTGA AGGCGGCCAT GGCCGGCCGC GGCCTAGGCA CCCCGGCCAC CCGCGCCCAG
ATCATCGAGA ACCTGATCGG CGAGCAATAC ATGCATCGCG AAGGCCGGGA ACTGATCCCG
ACCGCCAAGG CATTTACCCT GATGACGCTG CTCAACGGCC TCGGCATCAA GGAATTGACC
CAACCGGAAC TGACCGGCGA CTGGGAATGG AAGCTCGGCC GTATCGAGAA GGGCGAATTC
ACGCGCGACG AGTTCATGCG TGAAATCGCC GAAATGACCC GTCACATGGT CGAACGCGCC
AAGCAATACG AAGCCGACAC CATCCCCGGC GACTTCGGTG TGCTGACGGC GCCCTGCCCC
AAGTGCGGCG GCCAGATTCG CGAAACCTAC AAGAAGTTCC AGTGCGGCAG TTGCGACTAC
GCACTGTGGA AGATCGTCGC CGGCCGTCAG TACGAACCGG CAGAAATCGA GCAATTGCTG
ACCGAAAAGC AGGTCGGCCC ACTGACCGGT TTCCGCAACA AGATGGGCCG CAGCTTTTCC
GCCGCGATCA AGCTCAATGA TGAATTGCAG CCGGAATTCG ACTTCGGCCA GGACAAGGCG
GATGCCGCCG ATGCAGAACC CGTCGATTTC TCCGCGCAGG AAAGCCTGGG CAAGTGCCCG
AAGTGCGCGG CCAATGTCTT CGAGCACGGC ACTTCCTACG TCTGCGAAAA ATCGGTCGGC
CCGGCCAAGA CCTGCGATTT CCGCTCCGGC AAGATCATCC TGCAGCAGCC GATCGATGCC
GCCCAGATGA AGAAGCTGCT GGCCGATGGC AAAACCGACC TGCTGAAGGA ATTCGTGTCC
AACCGCACCC GCCGCAAGTT CTCGGCCTAT CTGGTCAATC AGGGTGGCAA AGTCGGATTC
GAGTTTGAAA AGAAAGTGGC AAAACCCAAG GCTCCAGCCA AAAAGAAGAC AGAAGCCTGA
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| Protein sequence | MSKKLIIAEK PSVAADIARA LGGFTKHDDY FESEELVLSS AVGHLLELAC PEEFEVKRGK
WSFAHLPVIP PHFALKPIEK TESRLKVLNK LIKRKDVTGL INACDAGREG ELIFNYIAQN
AKSGKPVQRL WLQSMTQGAI RDGFSRLRPG QEMEGLGDAA VCRSESDWLV GINGTRAMTA
FNSKTGGFHL TTVGRVQTPT LAIVVERERK IRDFKSRDYW EVEADFTAKA GSYKGKWFDE
AFKGKNDDEH ARADRLWEVA RAEAIRAATE GKPGEVTEEA KPETRLSPAL FDLTTLQREA
NARFGFSAKT TLSLAQALYE KHKVLTYPRT DSRCLPEDYL PTVKETLTIL TGEGAGKGHD
EVLLARYSPF AHQILARNWV LPNKRIFNNA KISDHFAIIP TPQAPKSLNE MEQKLYDFVV
RRFLSVFFPA AEYMVTTRIT RVEGHPFKTE GKVLVNPGWL AVYGKEGQDG DEGNLVAVDA
KEKVKTDEVT VKANATKPPP RYSEATLLSA MEGAGKMVDD EELKAAMAGR GLGTPATRAQ
IIENLIGEQY MHREGRELIP TAKAFTLMTL LNGLGIKELT QPELTGDWEW KLGRIEKGEF
TRDEFMREIA EMTRHMVERA KQYEADTIPG DFGVLTAPCP KCGGQIRETY KKFQCGSCDY
ALWKIVAGRQ YEPAEIEQLL TEKQVGPLTG FRNKMGRSFS AAIKLNDELQ PEFDFGQDKA
DAADAEPVDF SAQESLGKCP KCAANVFEHG TSYVCEKSVG PAKTCDFRSG KIILQQPIDA
AQMKKLLADG KTDLLKEFVS NRTRRKFSAY LVNQGGKVGF EFEKKVAKPK APAKKKTEA
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