Gene Psyc_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2144 
Symbol 
ID3516132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2647569 
End bp2649266 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content44% 
IMG OID637670860 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_265425 
Protein GI71066698 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00651842 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.65557e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAAAAGA TATTTCGGGT GATGATCATC ATTGCGATGT TAATCACCGC TTATCTGCTG 
ATTTTGGCAT GGCGTGATGA TTATGCAGAT GCCCCAGCTG TAGACACGGT GCCAGAAACT
GCAACTTCGG TAGGGGCTGA TATTCCTTCT ACTAGCGGTG CGGCAGGTGA TATTCCAGTA
CAGACGCTAC CTGTCGATAA CGGTACAGTT GATAATAGTG CTGTGACCGC CACACCTGCT
ACCGATGCAG GACTAATCAC AGTCACTACT GATCGCTATG ACATCAAAAT CAATCCAGAA
GGCGGTGACA TCGTTTATGC TGCGCTAAAG CAGTATGATG CAACCCTTGA TAGCGATAAG
CCTTTTGTAT TGCTAGAAAA TAACAGTAAC CGCGTTTACG TGGCTCAGTC TGGTCTGATT
GGTCAAAATG GTATCGATAC AGCAGAAGGT CGTGCCAAGT ACAGCCATAC CGCTAACAAT
TACGTGATGG AAAAAGGTCA GCAAACGTTA TCAGTGCCGC TCACCTACAA AAAAGATGGC
GTGACAATCA CTAAGACCTT TAGTTTCACT CACGATAAAT ATCCTATCGA TATCAGCTAT
AAGATTCAAA ATGCTTCTAC AGCGGCGTGG CAAGGTCAGA TGTTTGCCCA GCTAAAGCGT
GATGATAGTA AAGATCCTGG TATGTCTGAT AAAGGTGCGC TCAGTATGGC GACCTATTTG
GGCGGCGCTT GGGGTACACC GGATGATCCC TATAATAAGC TGAAATTTGG TAACTTTAAT
GATGGTGAGT TGACCACAAC CAGTGATAAA GGTTGGGTTG GTATCGTGCA GCATTACTTT
GTGTCAGCAT GGACGCCTGA AAACTTTACC GGTAAATTCT TTAGCCGTGA AACAGGTGAT
GATTACTTTA TTGGCTTTAA TAGTCAGCCT GTTAATGTTG CGCCAGACAA GCAAGTAACT
TTGAATGCGA CGCTATATGC AGGTCCTAAG GTTCAATCTG AGCTTAAAGA TGTGGCAGCA
GGATTAAATC AGACGGTCGA TTATGGTCTA TTATGGCCAA TTTCAAAGAT ACTATTTGCT
CTCTTGGATG GCATTCATAA AATCATCGGC AACTGGGGTT GGTCAATCAT CCTATTGACT
ATCTTGGTCA AATTCGCATT GATGTGGTTC TCAAACAAGA GCTACTATTC AATGGCGAAG
ATGCGTGCGA TTGCACCGCG TCTAGCAGCG CTAAAAGAAG AACATGGCGA CGATCGCATG
AAAATGTCGC AAGAAATGAT GGCAATGTAC AAAGAAGAAA AAGTCAATCC AATGGCGGGT
TGTTTGCCAA TCTTGATGCA AATGCCGATT TTCTTAGCCT TATATTGGGT ACTGGTTGAA
AGTATCGAGT TACGTCATGC ACCGTGGGTC TTGTGGATTC AGGATTTATC AGCGATGGAC
CCGTGGTTTA TCTTGCCACT ATTGATGGGT GTGTCGATGT TTGTACAGCA GCAGCTTAAC
CCGCAGCCAG CTGATCCAAT GCAAGCGAAA GTCATGAAGT TTTTACCGAT TATTTTCACC
GCGTTCATGC TGTTCTTCCC AGCAGGTCTG GTCCTATATT GGACAGTGAA TAACTTATTT
AGTATGACAC ATCAATATAT TGTCAATAAA AAAGTAGAAG AAGAGCAAAA GCTGCGTACC
GTAAAAGTAC TCGACTAA
 
Protein sequence
MQKIFRVMII IAMLITAYLL ILAWRDDYAD APAVDTVPET ATSVGADIPS TSGAAGDIPV 
QTLPVDNGTV DNSAVTATPA TDAGLITVTT DRYDIKINPE GGDIVYAALK QYDATLDSDK
PFVLLENNSN RVYVAQSGLI GQNGIDTAEG RAKYSHTANN YVMEKGQQTL SVPLTYKKDG
VTITKTFSFT HDKYPIDISY KIQNASTAAW QGQMFAQLKR DDSKDPGMSD KGALSMATYL
GGAWGTPDDP YNKLKFGNFN DGELTTTSDK GWVGIVQHYF VSAWTPENFT GKFFSRETGD
DYFIGFNSQP VNVAPDKQVT LNATLYAGPK VQSELKDVAA GLNQTVDYGL LWPISKILFA
LLDGIHKIIG NWGWSIILLT ILVKFALMWF SNKSYYSMAK MRAIAPRLAA LKEEHGDDRM
KMSQEMMAMY KEEKVNPMAG CLPILMQMPI FLALYWVLVE SIELRHAPWV LWIQDLSAMD
PWFILPLLMG VSMFVQQQLN PQPADPMQAK VMKFLPIIFT AFMLFFPAGL VLYWTVNNLF
SMTHQYIVNK KVEEEQKLRT VKVLD