Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2143 |
Symbol | trmE |
ID | 3516131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2645739 |
End bp | 2647175 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670859 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_265424 |
Protein GI | 71066697 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0104732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000152188 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACTAG CCAACCCTGA TTCGTTAAAA AATTCTAATT TGTCGAGTCT ACCTACCATT GCAGCCATTG CCACACCGCT TGGACGTGGT GGGGTCGGGG TTATTCGTCT GTCTGGTACA CGTGCGTATA GCATTGCTTG CACGCTGACA GGTAAGTCGG AATTTAAACC GCGCATGGCA AGTTTCTGCC GATTTTATCA AGCAGATGGT ACGGTTGTTG ATGAAGGGCT AGTATTGTAT TTTAAGGGTC CGCACTCGTT TACCGGCGAA GATGTGATTG AGCTGCAAGG TCATGGTGGT ATGATTTTAC AGAATCAGCT ACTGGCACGA GTATTTGAGT TAGGTGCAAA ACAAGCAGGC GCTGGAGAAT TTTCGTACCG TGCTTTTGAT AATGATAAGC TAGATTTGGT GCAAGCAGAA GCCATCGCTG ATGCCATTGA TGCAACCAGT GCTGCCGCTG CTAGCAGTGC CATACGTTCA CTCAGCGGCG AGTTTTCAAA AAAAATTAAT CAGTTATTAG AACAATTAAT TCATTTGCGA CTTCATGTTG AAGCGGCTAT TGATTTCCCT GATGAAGAAG ACGTTGATTT TTTATCAGAT GGAGTCATAC AAGGCAAGCT TGAGCAGACA CAAGAAAAAA TACAGCACGT ATTAGCGACT GCCAAGCAAG GACAGCTATT ACGTGATGGT ATTCATGTGG TGTTGGCAGG CAGACCAAAT GCGGGTAAAT CAAGCTTGCT GAATCGTTTG GCAGGGCAAG AGCGCGCTAT CGTTACAGAT GTTGCTGGGA CAACGCGTGA TACACTACAA GAGACAGTCG TGCTCAATGG TTTAACGCTA CACTTGACTG ATACTGCAGG TTTACGAGAG ACAGAAGATA CGGTCGAGCG TATCGGTATT GAGCGCGCGC GGACAGCGAT TACTCAGGCT GATATACTGC TGATGGTATA TGATGTAACC TGTGATCTTG AAGAAGAAAT CACACCCTTA CAGCTCGCTG AACAGCTATT TGGTGAGCTA CCAGAAGCCA AATGCTTATT AATTATCGCT AATAAAAGTG ATTTATTAAA CCACAATAGC AGCAAAGGAA TGACCTCTAT TTCGCAAGAA GAGATTTATA ATCGCGGCTA CGAGCAAGTG AATGTTTCAT GTGAAACAGG CGCAGGTATT GATGATTTAG TCGAAACTTT GTGTGCTAAA GTAGGCTTCC ATCCGCCAGA AAATAGCTTA ATCGCTCGTA CGCGGCATTT AGATGCCTTA AGAAGAACGG CTGAATATTT GGCAGAAGCT CATGAGCAGC TAACAGTTTT TAAAGCTGGG GAATTGGTTG CTGAAAGCTT ACGCCAAGCA CAGCATAGTT TAGGTGAAAT TACGGGCGAA TTTAGTGCAG ATGATTTATT AGGCAAGATT TTTGGCAGTT TTTGTATTGG TAAGTAA
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Protein sequence | MALANPDSLK NSNLSSLPTI AAIATPLGRG GVGVIRLSGT RAYSIACTLT GKSEFKPRMA SFCRFYQADG TVVDEGLVLY FKGPHSFTGE DVIELQGHGG MILQNQLLAR VFELGAKQAG AGEFSYRAFD NDKLDLVQAE AIADAIDATS AAAASSAIRS LSGEFSKKIN QLLEQLIHLR LHVEAAIDFP DEEDVDFLSD GVIQGKLEQT QEKIQHVLAT AKQGQLLRDG IHVVLAGRPN AGKSSLLNRL AGQERAIVTD VAGTTRDTLQ ETVVLNGLTL HLTDTAGLRE TEDTVERIGI ERARTAITQA DILLMVYDVT CDLEEEITPL QLAEQLFGEL PEAKCLLIIA NKSDLLNHNS SKGMTSISQE EIYNRGYEQV NVSCETGAGI DDLVETLCAK VGFHPPENSL IARTRHLDAL RRTAEYLAEA HEQLTVFKAG ELVAESLRQA QHSLGEITGE FSADDLLGKI FGSFCIGK
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