Gene Psyc_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2143 
SymboltrmE 
ID3516131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2645739 
End bp2647175 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content44% 
IMG OID637670859 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_265424 
Protein GI71066697 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0104732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152188 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTAG CCAACCCTGA TTCGTTAAAA AATTCTAATT TGTCGAGTCT ACCTACCATT 
GCAGCCATTG CCACACCGCT TGGACGTGGT GGGGTCGGGG TTATTCGTCT GTCTGGTACA
CGTGCGTATA GCATTGCTTG CACGCTGACA GGTAAGTCGG AATTTAAACC GCGCATGGCA
AGTTTCTGCC GATTTTATCA AGCAGATGGT ACGGTTGTTG ATGAAGGGCT AGTATTGTAT
TTTAAGGGTC CGCACTCGTT TACCGGCGAA GATGTGATTG AGCTGCAAGG TCATGGTGGT
ATGATTTTAC AGAATCAGCT ACTGGCACGA GTATTTGAGT TAGGTGCAAA ACAAGCAGGC
GCTGGAGAAT TTTCGTACCG TGCTTTTGAT AATGATAAGC TAGATTTGGT GCAAGCAGAA
GCCATCGCTG ATGCCATTGA TGCAACCAGT GCTGCCGCTG CTAGCAGTGC CATACGTTCA
CTCAGCGGCG AGTTTTCAAA AAAAATTAAT CAGTTATTAG AACAATTAAT TCATTTGCGA
CTTCATGTTG AAGCGGCTAT TGATTTCCCT GATGAAGAAG ACGTTGATTT TTTATCAGAT
GGAGTCATAC AAGGCAAGCT TGAGCAGACA CAAGAAAAAA TACAGCACGT ATTAGCGACT
GCCAAGCAAG GACAGCTATT ACGTGATGGT ATTCATGTGG TGTTGGCAGG CAGACCAAAT
GCGGGTAAAT CAAGCTTGCT GAATCGTTTG GCAGGGCAAG AGCGCGCTAT CGTTACAGAT
GTTGCTGGGA CAACGCGTGA TACACTACAA GAGACAGTCG TGCTCAATGG TTTAACGCTA
CACTTGACTG ATACTGCAGG TTTACGAGAG ACAGAAGATA CGGTCGAGCG TATCGGTATT
GAGCGCGCGC GGACAGCGAT TACTCAGGCT GATATACTGC TGATGGTATA TGATGTAACC
TGTGATCTTG AAGAAGAAAT CACACCCTTA CAGCTCGCTG AACAGCTATT TGGTGAGCTA
CCAGAAGCCA AATGCTTATT AATTATCGCT AATAAAAGTG ATTTATTAAA CCACAATAGC
AGCAAAGGAA TGACCTCTAT TTCGCAAGAA GAGATTTATA ATCGCGGCTA CGAGCAAGTG
AATGTTTCAT GTGAAACAGG CGCAGGTATT GATGATTTAG TCGAAACTTT GTGTGCTAAA
GTAGGCTTCC ATCCGCCAGA AAATAGCTTA ATCGCTCGTA CGCGGCATTT AGATGCCTTA
AGAAGAACGG CTGAATATTT GGCAGAAGCT CATGAGCAGC TAACAGTTTT TAAAGCTGGG
GAATTGGTTG CTGAAAGCTT ACGCCAAGCA CAGCATAGTT TAGGTGAAAT TACGGGCGAA
TTTAGTGCAG ATGATTTATT AGGCAAGATT TTTGGCAGTT TTTGTATTGG TAAGTAA
 
Protein sequence
MALANPDSLK NSNLSSLPTI AAIATPLGRG GVGVIRLSGT RAYSIACTLT GKSEFKPRMA 
SFCRFYQADG TVVDEGLVLY FKGPHSFTGE DVIELQGHGG MILQNQLLAR VFELGAKQAG
AGEFSYRAFD NDKLDLVQAE AIADAIDATS AAAASSAIRS LSGEFSKKIN QLLEQLIHLR
LHVEAAIDFP DEEDVDFLSD GVIQGKLEQT QEKIQHVLAT AKQGQLLRDG IHVVLAGRPN
AGKSSLLNRL AGQERAIVTD VAGTTRDTLQ ETVVLNGLTL HLTDTAGLRE TEDTVERIGI
ERARTAITQA DILLMVYDVT CDLEEEITPL QLAEQLFGEL PEAKCLLIIA NKSDLLNHNS
SKGMTSISQE EIYNRGYEQV NVSCETGAGI DDLVETLCAK VGFHPPENSL IARTRHLDAL
RRTAEYLAEA HEQLTVFKAG ELVAESLRQA QHSLGEITGE FSADDLLGKI FGSFCIGK