Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2059 |
Symbol | |
ID | 3516036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2533304 |
End bp | 2533957 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637670764 |
Product | LysE family amino acid efflux protein |
Protein accession | YP_265340 |
Protein GI | 71066613 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.513091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGTA TTGAGAATTA TCTAGGGTTT GTCATGGCGG CTATTTTGTT AAACGTAACC CCTGGCACTG ATAGCATGTA TATCATTACT CGTAGTATGT CACAGGGACA AACTGCAGGA TTTTATTCAG TACTCGGGAT TACCTCAGGT ATCTTGGTAC ATACTTTATT GGCTGCATTT GGATTGTCCG TACTATTAGC CAGTTCGCCA CTTGCATTTA CGCTAGTGAA ATATATTGGT GCAAGCTACT TATGCTATCT AGGCTTTAAA ATGCTGACTA GCAAACCAGT ACCTTTACTT GCCAGCAATT TACCCAATGA GGAAAAAATG GCGACTGCTC AACCGTTAGA TAGGTGGCAG ATATATAAGC AAGGAGTTAT CACCAACACC TTTAATCCAA AAGTTGCTTT ATTTTTTCTC GCATTCTTCC CGCAGTTTAT CGACCCTAGT TATGCTAATA GTATGCTGTC GTTTTTAGTG CTTGGTCTGA GCTTTGCCAC AACCGGTTTT ATATGGTGCT CGTGTTTAGC TTTATTAGCC TCAAAATTCA GTGAAAACCT GCGTAAAAAA CCCGCTATAG AAGTTATTTT AAATAGAATA AGTGGTGTGA TATTTATTGG GATGGGTATT AAGCTGTTGA CTGAGAAGGG TTGA
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Protein sequence | MFGIENYLGF VMAAILLNVT PGTDSMYIIT RSMSQGQTAG FYSVLGITSG ILVHTLLAAF GLSVLLASSP LAFTLVKYIG ASYLCYLGFK MLTSKPVPLL ASNLPNEEKM ATAQPLDRWQ IYKQGVITNT FNPKVALFFL AFFPQFIDPS YANSMLSFLV LGLSFATTGF IWCSCLALLA SKFSENLRKK PAIEVILNRI SGVIFIGMGI KLLTEKG
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