| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1982 |
|---|
| Symbol | rbgA |
|---|
| ID | 3515956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 2444303 |
|---|
| End bp | 2445259 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637670684 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_265263 |
|---|
| Protein GI | 71066536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.360178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA GAGTAAGTAT TCAGTGGTTC CCTGGGCATA TGAACAAAGC CCGCAATGAA
ATTAAAGAAA TCATGCCGCA GATGGATGTG GTTATCGAAG TGATTGATGC GCGTATTCCT
TATAGCAGCG AAAACCCAAT GGTCGCAGCG TTGCGTGGCG AAAAACCTGT CATCAAAATC
CTTAACAAAG CTGACCTTGC GGATCCTGAA TTGACCCAAG CGTGGATGGA CTATCTTGAG
CAGCAAAACG GTGTTAAAGC CATTGCTTGT GATACTGATA AAGCCAATGA TGTCAAACGT
ATCATCGCAA TCTGTAAACA ACTCGTCCCC AATAAAGTCG GAACCGGTCG CCAAATCAAA
GCCATGATTA TGGGAATTCC AAACGTCGGT AAATCGACTT TGATTAATAC TTTGGCTGGA
CGCGCCGTGG CAAGAACTGG CGACGAACCA GCGGTCACCA AGTCACAGCA GCTTATCAAG
CTTGACGATG ACATCATGCT CTATGATACG CCCGGTATGC TGTGGCCAAA AGTTGAAAAC
GAAAATTCTG GCTATCGCTT GGCAGCGACA GGCGGCATTC GCGACACGGC GTTTGACTTT
GCAGATGTTG CCAGTTATAC CGCTGAGTAT TTGTTAACCG CCTATCCTGA GCTACTAAAA
ACTCGCTATA AAATTGAAGA ACTGCCTAAG ACCGATTGGG AGTTTTTTGA AATAGCTGGT
CGCAATCGCG GCTGCGTACG CGCGGGCAAT AAAGTCGATA CCTACCGGAT GTCAGAAATC
CTAGTCAATG AGCTGCGTAG CGGTAAGATT GGACGTATCA CTTTAGAGAA GCCTGCTATG
ACTGAGGCTG AAGAAGTCAT CGTCGCTGAG CAACGTATCG CGTCAGAAGA AAAAAGAATC
GCTAAAGAAG AAGAGAAACG CTTGCGTCGC TTGAAAACGC GGAAGAATCG GAAGTAA
|
|---|
| Protein sequence | MDKRVSIQWF PGHMNKARNE IKEIMPQMDV VIEVIDARIP YSSENPMVAA LRGEKPVIKI
LNKADLADPE LTQAWMDYLE QQNGVKAIAC DTDKANDVKR IIAICKQLVP NKVGTGRQIK
AMIMGIPNVG KSTLINTLAG RAVARTGDEP AVTKSQQLIK LDDDIMLYDT PGMLWPKVEN
ENSGYRLAAT GGIRDTAFDF ADVASYTAEY LLTAYPELLK TRYKIEELPK TDWEFFEIAG
RNRGCVRAGN KVDTYRMSEI LVNELRSGKI GRITLEKPAM TEAEEVIVAE QRIASEEKRI
AKEEEKRLRR LKTRKNRK
|
|---|
| |