Gene Psyc_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1980 
Symbol 
ID3515954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2442708 
End bp2443445 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID637670682 
Productdienelactone hydrolase 
Protein accessionYP_265261 
Protein GI71066534 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.228213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTA AGACGTTTGA ATTAATCAGT ACTACAGAAA ATGGTATTCA ATTGATCAGC 
TATGTCGCGC TGCCAGAAGC GGCGTCCGAT GACAATCCCG TAGCCGGTAT TTTGGTCGCA
CCAGAATGGT GGGGCGTGGT CGAGCATCCA AAGAACGTCA CTGAACGCTT AGCAAAAGCA
GGCTACGCTG CGGTCGCTAT GGATGTATAC GGTGAAGGCA AGCTAACTTC AGATGCCGCA
CAAGCAAATA TGTGGATGGA ACAAGTGTTA GCCGATCAAG ACATGCTCAT GGCACGCTGC
CGTTTGATTC TTAATGACTT TAGCGATCAG CTAGCCGTTG ATAGCGATAA CTTGGGTGCG
ATTGGCTATT GCTTTGGTGG CAAAATCGTC CTTGATATGG CGCGAGAAGG TATGCCCTTA
AAAGCAGTGG CTACCTTCCA CGGCAACCCA TCACCTAAGC AGCCTGCCGA TAAGCAGTTC
AGCGCTAAAG TATTGGTCGC TCATGGTCGC GATGATTCTA TGGTATCGAT GGACGCCATA
GAAGGTCTCA AAGCAGAATT GGACGGCGCA GATATTGATT ACACCATTGA TGTTTATGAT
GGCGCTAAGC ACGGATTTAC CAATCCAAAT GCTGACGAGC GCGCTGCCAA AAATGGCGTA
GACTTGGGCT ATAACGAAAC GGCTGCTAAA CAGAGCTGGG ACAATATGTT GGAGTTTATG
AAAGATAATT TGGCGTAA
 
Protein sequence
MSIKTFELIS TTENGIQLIS YVALPEAASD DNPVAGILVA PEWWGVVEHP KNVTERLAKA 
GYAAVAMDVY GEGKLTSDAA QANMWMEQVL ADQDMLMARC RLILNDFSDQ LAVDSDNLGA
IGYCFGGKIV LDMAREGMPL KAVATFHGNP SPKQPADKQF SAKVLVAHGR DDSMVSMDAI
EGLKAELDGA DIDYTIDVYD GAKHGFTNPN ADERAAKNGV DLGYNETAAK QSWDNMLEFM
KDNLA