Gene Psyc_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1972 
SymbolfabF 
ID3515946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2432160 
End bp2433575 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content49% 
IMG OID637670674 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_265253 
Protein GI71066526 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.16517e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.39166e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCCAGC ACAGCAGTTT ACCCAACGAC TCACTTATCG ACCAAGCTAT GAATAGTACT 
ATTAATAGCC CTACTGCCAA TACTCCTGCC ACCGCTCAGA CAAAAAAACG TCATAAGCCG
CCACATTTCG AGCGCACTGA TGATATGCGT GTCGTAGTGA CTGGCATGGG TGCCGTTACG
CCATTGGGAT TAGATGTCGA AAGCTCATGG GCGAAGCTCC TTAAAGGTGA AAGCGGTATC
ACAGCTATCA GTCATTTTGA TGCGTCTGGT TATCGCGCGC AAATCGCAGG CGTGGTCAAA
GACTTTGATG CCAAGCAATA CATGAACGCC AAAGACGCGC GCCGTTATGA TGAGTTTATA
CATTATGCGG TTGCTGCCTC TTCTATGGCG CTACATCAAG CAGGTTTTAT CGAGGAAGTG
AGCGCTGCTG ACGCTCCGGT ACAAGGGGTT GATCAAGAGC GCTTTGGGGT GATTATAGGT
TCAGGGATTG GTGGTATTCA AAACATCGAA AACAGCCGTG ATACCTTACG TGAAAAAGGC
TCAAGCAAAG TCTCCCCCTT TATTATTCCA GGCTCTATTG TTAATATGGC AGCGGGCTTA
GTAGCTATTA AACACTGTTT GAAAGGTCCC AATCTTGCAA CCTCAACTGC CTGTACCACA
GCGACTCATG CGATTGGTCT AGCAGCGCGG TTGATTGCTT ATGGTGACGC CGATGTGATA
CTGGCAGGCG GTAGTGAAAA AGGCTCAAGC CCGCTTGGTA TCTCAGGTTT TGGTGCTATG
CATGCCCTCT CAACCCGCAA TGATGAGCCA ACTCGCGCTT CACGCCCGTT TGATAAAGAT
CGCGATGGTT TTGTACTTGG TGATGGTGCT GGCGTAATGA TACTAGAAAG CCTTGCTCAT
GCAAAAGCAC GCGGTGCGAC GATATTGGCT GAATTGGTTG GCTTTGGTAT GAGTGACGAT
GCCAGTCATA TCACCGCGCC TCCAGAAGAT GGTAGCGGTG CGGCACGAGC GATGCGTAAT
GCCTTAAATG ATGCGGGTAT TGAGCCGTCA GTCGTGGGCT ATGTCAATGC CCATGGCACC
AGCACGCCTG CCGGTGATGT CGCGGAATCT ATCGCCATTG AAACGGTATT TTCGCCTGTG
AAAGACACCA TTTTGGTCAG CTCAACCAAA TCGATGACCG GTCATCTGCT TGGCGCTGCG
GGTGGTGTTG AAGCTATTTT TACTGTACTT GCTCTGCAAC ATCAGCAAGT ACCGCCAACG
ATTAATTTGG ACAATATTGA AGACAACTGT AATTTGGATT ATGTCGCCAA TCAATCGCGT
CAAGTAGATA ATTTGCAGTA CGCGGTATCC AATAGCTTTG GTTTTGGCGG CACCAACGGC
TCACTAATAT TTGCACGTTG GCCTGTCAAT CAGTAA
 
Protein sequence
MSQHSSLPND SLIDQAMNST INSPTANTPA TAQTKKRHKP PHFERTDDMR VVVTGMGAVT 
PLGLDVESSW AKLLKGESGI TAISHFDASG YRAQIAGVVK DFDAKQYMNA KDARRYDEFI
HYAVAASSMA LHQAGFIEEV SAADAPVQGV DQERFGVIIG SGIGGIQNIE NSRDTLREKG
SSKVSPFIIP GSIVNMAAGL VAIKHCLKGP NLATSTACTT ATHAIGLAAR LIAYGDADVI
LAGGSEKGSS PLGISGFGAM HALSTRNDEP TRASRPFDKD RDGFVLGDGA GVMILESLAH
AKARGATILA ELVGFGMSDD ASHITAPPED GSGAARAMRN ALNDAGIEPS VVGYVNAHGT
STPAGDVAES IAIETVFSPV KDTILVSSTK SMTGHLLGAA GGVEAIFTVL ALQHQQVPPT
INLDNIEDNC NLDYVANQSR QVDNLQYAVS NSFGFGGTNG SLIFARWPVN Q