Gene Psyc_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1966 
Symbol 
ID3515940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2426328 
End bp2427047 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID637670668 
Producthypothetical protein 
Protein accessionYP_265247 
Protein GI71066520 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.73839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000135585 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAATC TTATGACCAA ATCCTCACCG AATAATCCCA CTCATCTAGC AAAAGCTGCT 
AACGACTTTG TGTGGACGCA GAAAATAAAG AACGATACTG GAAATATAGA AACCCATCCG
TTCGATCCGG TTTTACCGCC TGATGCTACT GTGATGATGA TGGGGACCTT TCCACCGACT
GCTGATAAAT GGGCAATGCA TTTTCATTAT CCGAACTTCT ATAATGATAT GTGGCGTATT
TATGGAAGCG TGTTTTTTGA CGATGTTGAT TATTTTAAAG TAGGTGAAGA AAAACGCTTC
GATCCTGAGC GCATTCGCAA TTTTATGTTC GAGCGAGGTA TTGCTTCTTG TCCGACCGTA
AAGCAAGCCA TTCGTGAAAC GGGTAATGCC TCAGATAAAA ATTTAACTGT CGTCACGCCA
GTTGACCTAG ATAATATCTT GCCACAAGTG CCAAAGGTTA AAACGTTATT TACAACGGGC
GGTAAGGCAA CCGAAATATT ACTCAACTTA TTAGCTGAGC CACCTGCCAA ATCTAAGTAC
CCTAAGACTA ATCAAAGTAT GGACTATCCT TACCAATGGC AGGATGCAAA TAATAAAAAA
GCGGATGTTA ATAATCTAAC CTTATATAGA ATGCTTTCAA CTTCACGTGC ATATCCTTTA
GCCTTAGATA AAAAAATCGC TGCTTATAAA GACTTCTTTA AGAAGGTTGG TAAGCTATAG
 
Protein sequence
MKNLMTKSSP NNPTHLAKAA NDFVWTQKIK NDTGNIETHP FDPVLPPDAT VMMMGTFPPT 
ADKWAMHFHY PNFYNDMWRI YGSVFFDDVD YFKVGEEKRF DPERIRNFMF ERGIASCPTV
KQAIRETGNA SDKNLTVVTP VDLDNILPQV PKVKTLFTTG GKATEILLNL LAEPPAKSKY
PKTNQSMDYP YQWQDANNKK ADVNNLTLYR MLSTSRAYPL ALDKKIAAYK DFFKKVGKL