Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1934 |
Symbol | fadB |
ID | 3515904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2382574 |
End bp | 2384733 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670632 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_265216 |
Protein GI | 71066489 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.615527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATACC AAGGAAATCG CATTACGGTG ACAATGCTAG AGGATGGCAT CGCCAACATG CAGTACAACG CCGAAAATGA GAGCGTGAAC AAGTTTGATA CTGAGACTAA TAAGCAGTTT GCTGAAGTCG TTAATGCGTT AGAAAAAGCG GATGACGTTA AGGGCTTAAT TGTCACTTCA AGCAAAGGCG TCTTTATCGC TGGTGCGGAC ATCACGGAAT TTGTGGCCTC TTTTAAGCAA TCAGAAGAAG AAATCAAAGA TTGGGTTATT AATATTAATG ACGCCTTTAA TCGCTTTGAA GACCTACCAT TCCCGAAAGT AGCTGCCATC AATGGCGCCG CGCTTGGCGG TGGTTGTGAG ATGACTTTAG TTTGCGAATA TCGTGTCATG AGTGACAAAG CGATCATCGG TCTACCAGAA ACTCAACTCG GTATTTTCCC AGGTTTTGGT GGTACCGTGC GTAGTACGCG TGTCATTGGT ATCGATAATG CGCTTGAGCT GATTGCAACG GGTGCACCTA AAAAAGCACT TGATGCCCTA AAACTAGGCT TGGTTGATGC GACCGTTGCT GCTGATGATT TGCAAGATGC TGCCATTGAT CTGGTCAAAA AATGTATCTC AGGTGAGCTT GATTGGAAAG CGAAGCGTGA AGAGAAGCTG GTTGCTGTTA AATTAAATCA GCTTGAACAA GCGATGGCGT TTAACAGTGC AAAAGGTATG ATTTTTGCCA AAGCCAATCC TAAGCAATAC CCTGCGCCAG CACTTGCTAT CGCTGCTATC GAAAAACACG TTAACTTACC ACGTGATAAA GCAATCGAAG TAGAAGCGGC AGGTTTTGCA AAAGCTGCGA AAACCCCACA AGCAGAAAGC TTGGTTGGTC TGTTCTTAAG CGATCAGTTG GTTAAAAAAT TAGCCAAGCA ACACAGCAAA AAAGCACATG AAATTAATGA AGCGGCAGTA TTGGGTGCTG GTATCATGGG CGGCGGTATC GCTTATCAGG CAGCCAGCAA AGGCTTGCCA ATCATCATGA AAGACATCAA GTCTGAGCAA TTAGACCTTG GTATGGGCGA AGCCAGCAAG TTATTGGGCA AAATGGTTGA TCGCGGTAAG ATGACCCCCG CCAAAATGGG CGAAACCTTA AGCCGTATCC GTCCTACTTT GAATTATGGC GATTTTGCTG AAACGGACAT CGTTATCGAA GCAGTGGTAG AAAATCCAAA TGTGAAGCGT GCGGTATTAA AAGAAGTTGA AGGCTTGGTA AAAGACGATT GTATCCTAGC CTCAAACACT TCGACTATCT CTATTACTTT CTTGGCTGAA GCACTTGAGC GTCCAGAAAA CTTCGTCGGT ATGCATTTCT TTAACCCAGT ACACCGTATG CCATTGGTCG AAGTTATCCG CGGTGAGAAA TCATCTGAAG AAGCGATTGC GACCACGGTT GCACTAGCCT CTAAAATGGG TAAAGTACCT GTTGTCGTTA ATGACTGCCC AGGTTTCTTA GTCAACCGCG TATTGTTCCC ATACTTTGGC GCCTTTGATT TATTACTTAA GCAAGGTGCT GATTTTGCTC ATGTCGATAA AGTCATGGAA AAATTCGGCT GGCCTATGGG TCCTGCATAT CTAATCGACG TTGTTGGTTT AGATACGGGT GTTCATGGCG CAGAAGTCAT GGCAGAAGGT TTCCCTGACC GCATGAAGCC TGATTATAAA GGTGCCATCG AGCTTTTATA TGAAAACAAA CGCCTAGGTC AGAAAAATGG TGTTGGTTTC TATAAGTATG AAATGGACAA ACGTGGCAAG CCAAAGAAAG TTGCTGATGA AGCCACTTAT GAGCTATTAA AAACGACGAC TGATAGCGAA AAACAGACCT TTGATGATCA AGCAATCATC GACCGTACCA TGCTGGCTTT CTGTAATGAA ACCGTACGCT GCCTAGAAGA CAACATCGTC AGCACGCCGT CAGAAGCGGA TATGGCGATG ATCATGGGTG TTGGTTTTCC ACCATTCCGC GGTGGCCCTT GCCGTTATAT CGACCAAATG GGTTTAGATA ACTACTTGGC ACTATGTGAA AAATATGCGC ACCTTGGCAA AGCCTATGAA GCCCCGCAAA AGATTCGCGA CATGGCAGCA GCAGGCGAGA CCTTTTACGC AACCGCGTAA
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Protein sequence | MVYQGNRITV TMLEDGIANM QYNAENESVN KFDTETNKQF AEVVNALEKA DDVKGLIVTS SKGVFIAGAD ITEFVASFKQ SEEEIKDWVI NINDAFNRFE DLPFPKVAAI NGAALGGGCE MTLVCEYRVM SDKAIIGLPE TQLGIFPGFG GTVRSTRVIG IDNALELIAT GAPKKALDAL KLGLVDATVA ADDLQDAAID LVKKCISGEL DWKAKREEKL VAVKLNQLEQ AMAFNSAKGM IFAKANPKQY PAPALAIAAI EKHVNLPRDK AIEVEAAGFA KAAKTPQAES LVGLFLSDQL VKKLAKQHSK KAHEINEAAV LGAGIMGGGI AYQAASKGLP IIMKDIKSEQ LDLGMGEASK LLGKMVDRGK MTPAKMGETL SRIRPTLNYG DFAETDIVIE AVVENPNVKR AVLKEVEGLV KDDCILASNT STISITFLAE ALERPENFVG MHFFNPVHRM PLVEVIRGEK SSEEAIATTV ALASKMGKVP VVVNDCPGFL VNRVLFPYFG AFDLLLKQGA DFAHVDKVME KFGWPMGPAY LIDVVGLDTG VHGAEVMAEG FPDRMKPDYK GAIELLYENK RLGQKNGVGF YKYEMDKRGK PKKVADEATY ELLKTTTDSE KQTFDDQAII DRTMLAFCNE TVRCLEDNIV STPSEADMAM IMGVGFPPFR GGPCRYIDQM GLDNYLALCE KYAHLGKAYE APQKIRDMAA AGETFYATA
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