| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1880 |
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| Symbol | pilP |
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| ID | 3515849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2317816 |
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| End bp | 2318355 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637670577 |
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| Product | type IV pilus assembly |
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| Protein accession | YP_265162 |
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| Protein GI | 71066435 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000158762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC AAAAACTGCC TAAGTTAAGG TTATTGCTAT TAAGTGCTGC TGTTTTATTT
ATGACGGGTT GTACGGATCG TATCGGCTTA GCAGAACAAG CAATGGCTGA TATCCGTAAC
CAGCCTGCGC AGCCGATTGA GCCACCGCCT AAGGCTGAGC TGATAGAAGA TTTTGTCTAT
AGCGCCAGTG CGCAGCGTAG TCCATTTTTG CCACCGAGTT TAGTTAACGT ACAAGGTCCG
ACCACCTTTA TTGATGGGGT ACGCCCTGAT ATAACTCGAG TCAAAGAGCC ACTTGAACAG
TACGAGCTGA CGCAACTGGT CTTTCGCGGT GTGGTTATCT CACCTGAAGG TCAACAGTAT
GCTTTAGTAC AGCGTCCGGA TGGTTCGGTT GCCAGTGTTA GAGTGGGTAG TTATCTTGGA
TTGAATGACG GTCGTATTGT TGAAATCACG CCGACGCAGA TTAATTTGAT TGAAATTGTG
CCAGACAGTC GTGCTGGGTT TGTTGAAAAA CCCCAATCAC TGGTGTCTCC TATAAGCTAA
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| Protein sequence | MTSQKLPKLR LLLLSAAVLF MTGCTDRIGL AEQAMADIRN QPAQPIEPPP KAELIEDFVY
SASAQRSPFL PPSLVNVQGP TTFIDGVRPD ITRVKEPLEQ YELTQLVFRG VVISPEGQQY
ALVQRPDGSV ASVRVGSYLG LNDGRIVEIT PTQINLIEIV PDSRAGFVEK PQSLVSPIS
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