Gene Psyc_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1836 
SymbolgltP 
ID3515805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2256923 
End bp2258296 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content44% 
IMG OID637670533 
Productsodium/proton:dicarboxylate (glutamate) symporter 
Protein accessionYP_265118 
Protein GI71066391 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAA ATATGGGTTT GACGGGCAAG ATTATTGTTG CCATGGTGCT CGGTATTATA 
CTGGGTCTAT TTATAAACTA TTCTGGCTTG AACACGGAAG GCAGCTTCGT TAATAATTAT
GTCACCAATG GTTTTCTTGC CATTGTCGGT AAGCTGTTTG TTAACTCGCT CAAAATGCTC
GTCGTACCGC TGGTCTTGAT TTCACTTATC TGCGGCGTGT GCGGTATTGG TGACATACGT
CTGCTTGGAC GCATTGGCAC CAAAACCTTT TTCATCTATA TGGTGACGAC GGCGCTAGCG
ATTGCAACTG CTATCGGGCT TGGCGTGCTA TTCGGTATTG GCAAAGGCAT GAATATAGAA
ACAGAGGCGG CGTTTGAGTC TGAGAAAGCG CCACCACTAC TCGATGTGTT TTCTAATATT
ATTCCATCTA ACCCCATCAG TGCGATGGCA AATGGCGACA TGCTATCGAT TATTTTCTTT
GCCGTTTTGA TTGGTATTAG TATTTTGATG GTAGGAAAAC CAGCTAAAGG CTTGGTTCAA
AGTTTAGAGT TAATCAATGA AGTCATCTTA AAAATGGTGA CCATCATTAT GAATTTAGCG
CCGTATGGTG TTTTTGCGCT GTTGACCAAA GCAATGGCTG AGCTTGGCTT AGACCTTATT
TGGTCATTAC TTGGTTATGT TGCGGTACTG ATTGGCTCAC TGGCATTCCA TTTCTTTGTG
ACCATGATGA TTGTCTTCAA GCTATCTTCA GGCTTATCAG TCAGAACGTT TTTAGCAAAA
ATGCGTGAAG TACAGATTTT TGCTTTTAGT ACCTCAAGCT CAAATGCAAC GATTCCAATC
ACCTTGCGTA CGGTCACCAA GCGCATGGGT GTTAATAACT CGGTTGCTTC GTTTACCATC
CCTTTTGGTG CGACCATCAA CATGGATGGT ACGGCTATCA TGCAAGGGAC AGCGACCATT
TTTATTGCCA ATATTTATGG TATTGACTTG GGTGTAACCG AGTATTTGAC CGTTATCTTG
ATGTCGGTGC TCGCCTCTGT CGGTACGGCA GGTGTTCCAG GTGTTGGTCT TATTATGCTT
TCAATGGTAT TTGCCCAAGT GGGTCTGCCG ATTGAAGGCA TTGGTCTTAT CTTAGGTGTG
GACCGTATTC TTGATATGTT ACGTACAGCG GTCAACGTCG GTGGCGATGC TGCAGTGACC
GCTATCGTTG CAAAATCAGA AGGTAAAATG GATTTAGCAA TTTATAATGA TCCTGATGCT
GGTTCAAAAG ACGTATTTGA CGGTCATATC GATGAGAACA GCGAACGCGA ATTCTCTGAA
GTCTTTAGCG ATGGCATTAT GGGCAGCGAG TATGACGATG TTAAGCGCGG CTAA
 
Protein sequence
MWKNMGLTGK IIVAMVLGII LGLFINYSGL NTEGSFVNNY VTNGFLAIVG KLFVNSLKML 
VVPLVLISLI CGVCGIGDIR LLGRIGTKTF FIYMVTTALA IATAIGLGVL FGIGKGMNIE
TEAAFESEKA PPLLDVFSNI IPSNPISAMA NGDMLSIIFF AVLIGISILM VGKPAKGLVQ
SLELINEVIL KMVTIIMNLA PYGVFALLTK AMAELGLDLI WSLLGYVAVL IGSLAFHFFV
TMMIVFKLSS GLSVRTFLAK MREVQIFAFS TSSSNATIPI TLRTVTKRMG VNNSVASFTI
PFGATINMDG TAIMQGTATI FIANIYGIDL GVTEYLTVIL MSVLASVGTA GVPGVGLIML
SMVFAQVGLP IEGIGLILGV DRILDMLRTA VNVGGDAAVT AIVAKSEGKM DLAIYNDPDA
GSKDVFDGHI DENSEREFSE VFSDGIMGSE YDDVKRG