| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1795 |
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| Symbol | ahpF |
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| ID | 3515764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2205524 |
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| End bp | 2207101 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670492 |
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| Product | alkyl hydroperoxide reductase subunit F |
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| Protein accession | YP_265077 |
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| Protein GI | 71066350 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.114206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGACC AAAGCTTATT AGATGCAGTA AAGAGCTATA GCGCAAACAT GACCCGCCCA
ATCAGCTTTG TATTGGGTAG CGGCGAGCAT AGCAAGCGTG CTGAGCTGGT TGACTTTTTG
ACCAAAATCG CTGGTACGAC CGATAAGATT AATTTTGATG CACAAGCTAA CGATGACACT
TTACCAAGCC CAATCAGCTT TAAAGTAATC AATCATATCG ATGGCGCTTT GATGGATACG
GGTATTGTCT TTAGTGGTAT TCCAGGCGGA CATGAATTTA CTTCATTGAT ATTGGCAATT
TTGCAAGCCG GTGGTCATAC GTTAAAGCTG GACGAAGGCA TTCAAAAGCT CATTAAACGC
TTTAATAAGC CGTTACAGTT TCAGACTTAT GTCTCATTAT CTTGCCACAG TTGCCCAGAA
GTTGTGCAAG CGCTGAACCA ATTTGCGCTG CTAAACGATG ACATCAGTAA TGAGATGATT
GACGGTGCAT TGTTCCAAGA GCAAGTAGAA GCCAATAATA TTCAAGGTGT GCCAGCAGTA
TTTTTGAATG GTAAACCTTT TGCTAATGGT CTGATTGACA CGGCTAAATT GATTGAGAAG
TTGCAAGAGC AATTTCCTGA CTTGTTAGCA GAAGCTGATG ATGATGCTGA GCAGTTAGAG
CAGCAAGATG TGACGATTAT CGGTGCTGGT CCTGCTGGGG TTGCTGCGGC GATTTATACC
GCGCGTAAAG GTCTAAAAGT GACGATGGTT GCTGACCGTA TCGGTGGGCA GGTGAAAGAT
ACGCAAGATA TTGAGAATTT AATCTCGGTG CCTTTAACGA CGGGTAGTGA GTTATCTGCC
AATTTTGAAA AGCATTTGCG CGAATACAAC ATCACGCTTA AAGAGCATGT CAGTGTCAAA
GAGATTAGTG AGACTGCTGA TGAAAACTAC AGCATCCATC TAAATACCGG TGAGACGTTT
GAGACGCGCA GTATTATCTT AGCAACTGGT GCTCAGTGGC GTAAGCTAGG TGTCGCTGGC
GAAGAAGAAA ACATCGGTAA AGGCGTGGCT TTTTGTGCGC ACTGTGACGG TCCATTCTTT
AAAGGTAAAG ATATTGCCGT CGTCGGTGGC GGTAACTCTG GTATCGAAGC GGCATTAGAT
CTTGCTGGTA TCGTGAAGCA TGTGACCGTG CTTGAGTTTG CTGATGATTT GAAAGCGGAT
CAGGTATTGA TTAATAAAGC CAAAGAAAAG TCAAATATCG ATATCATTAC CAGTGCAGCA
ACCCAAGAAA TTAAAGCGAC TGATGGTAAA GTATCGTCTC TCGTTTATCA AGATCGCAAT
AGCAACGACA ATAAAGAGCT TGATGTTGCA GGGGTGTTTG TACAGATTGG TTTGATACCC
AATACTGAGT TCGTCAAAGG CTTCATCGAT TTAAACCGCT TTGGTGAGAT TGAGATTGAT
GAGCGCTGCC GCACAGATCG CAAAGGTATC TTTGCTTGTG GTGATGTAAC GACTGTACCC
TTTAAGCAGA TTAATATTGC GATGGGTGAA GGTTCAAAAG CGGCATTATC AGCGTTTGAA
TATTTGGTCA TGCAGTAA
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| Protein sequence | MIDQSLLDAV KSYSANMTRP ISFVLGSGEH SKRAELVDFL TKIAGTTDKI NFDAQANDDT
LPSPISFKVI NHIDGALMDT GIVFSGIPGG HEFTSLILAI LQAGGHTLKL DEGIQKLIKR
FNKPLQFQTY VSLSCHSCPE VVQALNQFAL LNDDISNEMI DGALFQEQVE ANNIQGVPAV
FLNGKPFANG LIDTAKLIEK LQEQFPDLLA EADDDAEQLE QQDVTIIGAG PAGVAAAIYT
ARKGLKVTMV ADRIGGQVKD TQDIENLISV PLTTGSELSA NFEKHLREYN ITLKEHVSVK
EISETADENY SIHLNTGETF ETRSIILATG AQWRKLGVAG EEENIGKGVA FCAHCDGPFF
KGKDIAVVGG GNSGIEAALD LAGIVKHVTV LEFADDLKAD QVLINKAKEK SNIDIITSAA
TQEIKATDGK VSSLVYQDRN SNDNKELDVA GVFVQIGLIP NTEFVKGFID LNRFGEIEID
ERCRTDRKGI FACGDVTTVP FKQINIAMGE GSKAALSAFE YLVMQ
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