Gene Psyc_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1750 
SymbolmurC 
ID3515718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2155660 
End bp2157099 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content45% 
IMG OID637670446 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_265032 
Protein GI71066305 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCT CTGCTAAAGC CTTAACCAAA CGTTTGATTG AAATACCAGA AATGCGCCGT 
ATTCAGCATT TGCATTTTAT TGGTATTGGC GGTTCGGGGA TGTGCGGTAT TGCTGAGGTA
ATGAACAATC AAGGCTACAA AGTGAGTGGC TCTGATATTA CTGAGAGTCT CGTTACCAAA
CGCTTAGAGC AGATTGGTAT CGATATTAAT ATTGGGCATG ACTCCAAAAA TATCGCCAAT
GCTGATGTCA TCGTTGTATC GTCTGCGATT GACCGTAGCA ACCCTGAAGT AAAAGCGGCA
CTAGAAGCGC GTCTTCCTGT GGTTCGCCGT GCAGATATGC TCGGTGAGCT GATGCGTTAT
CGTCATGGTA TTGCTATTGC TGGCGCACAT GGTAAAACCA CCACCACCAG TTTACTGACC
ACCATGATGG CAGAAGGCAA TTTAGATCCT ACTTATGTGA TTGGCGGTAA GCTTAATGCC
TCTGGCAAAA ATGCCGCCCT TGGTAGCAGT CGTTTTCTGA TTGCCGAGGC GGATGAATCT
GACGCCTCAT TTTTGTCATT GCATCCGATG GCAGCGATTG TCACCAATAT CGATCAAGAT
CATATGGAAA CCTATGGCAA TAGCTTTGAT AAATTAAAAG CAGCCTATAT CCAGTTTTTA
CAAAATATGC CGTTTTATGG TCTGGCAGTG GTCTGCGGTG ATGACCCTGA GCTATACGCG
ATGATTGATG ACATTGGGCG TCCAGTATTG ACCTTTGGTC TTGAGCCATT TAACGATGTA
CAAGCCGTTG ATTTGGTCAC CGAAGGCACG AAAACTCACT TTACCGTACT ACGCCGTGAT
CATGAGCCAT TGCGTCTGAC CCTAAATATT CCAGGTGTGC ACAATGTCTA CAATGCGCTT
GCAGCCATCA CTATGGCAAC CGACGAAGGC GTCGACGATG CGGCAATCAC CCGTGCGCTA
CAAAAATTTG AGGGCGTTGG TCGTCGTTTT GAGCAGCATG CCTCTGTCAC TATCGATGAT
GGCGATGTTT TACTAATTGA TGATTACGGT CATCATCCTA AAGAAGTCGA TGCCACTATC
AAAGCGGCGC GTCAAAGTTT TCCTGAGCGC CGTTTGGTTA TGCTGTTTCA GCCACATCGC
TATAGTCGTA CGCGTGATTG CTTTGATGAT TTTGTCGAAG TACTCTCAAG TGTTGATGAG
TTATTATTAT TGGATGTTTA TTCAGCCGGT GAAAGTCCTA TTGCCGGTGC GGATACCAAA
GCTTTGGCAC GCAGTATACG TTTGCGCGGT GCAGTCGAGC CAACGATAGT TGATAAAAAA
AATATTGCCG CTGTAATGCA GCGATTATTA AAAGCAAATG ACATGCTGAT TACCCAAGGT
GCCGGTAATG TAGGTCAAAT AGCTATCGAA TTGGCTGCCA ACGATCTATA TATCAAATAA
 
Protein sequence
MSTSAKALTK RLIEIPEMRR IQHLHFIGIG GSGMCGIAEV MNNQGYKVSG SDITESLVTK 
RLEQIGIDIN IGHDSKNIAN ADVIVVSSAI DRSNPEVKAA LEARLPVVRR ADMLGELMRY
RHGIAIAGAH GKTTTTSLLT TMMAEGNLDP TYVIGGKLNA SGKNAALGSS RFLIAEADES
DASFLSLHPM AAIVTNIDQD HMETYGNSFD KLKAAYIQFL QNMPFYGLAV VCGDDPELYA
MIDDIGRPVL TFGLEPFNDV QAVDLVTEGT KTHFTVLRRD HEPLRLTLNI PGVHNVYNAL
AAITMATDEG VDDAAITRAL QKFEGVGRRF EQHASVTIDD GDVLLIDDYG HHPKEVDATI
KAARQSFPER RLVMLFQPHR YSRTRDCFDD FVEVLSSVDE LLLLDVYSAG ESPIAGADTK
ALARSIRLRG AVEPTIVDKK NIAAVMQRLL KANDMLITQG AGNVGQIAIE LAANDLYIK