| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1725 |
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| Symbol | spoT |
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| ID | 3515693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2124740 |
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| End bp | 2126926 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670421 |
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| Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase:(p)ppGpp synthetase II |
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| Protein accession | YP_265007 |
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| Protein GI | 71066280 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.798574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAA ACTTGCCCAA ACTCAGTCAT CCATTAGTTG ATGATGCTCA ATATAACCTG
CTGCGTTCAG TAGGTTATCT CACGGGCGCT GAACGCCGTG ATATTGTTGA TGCCTGTGAG
TTCGGTGATG TTGCGCATAT TAAAGACAAG CGCAAGTCAG GGGAGCCTTA TATCACGCAT
CCGATTGCTG TCGCTGAGAT ACTGGCAGGC TTTCGCTTGG ATCGAGATAC CATTATTGCT
GCAATTTTGC ATGATACGGT TGAAGATACG GAAGTAAGCG ACGAGCAGAT TGAGACGCGT
TATGGCAAAG TGGTTTCTAG ACTGGTCGAT GGTGTCACCA AATTAAAATC ATCCACGCAT
AATAAACAAG AAAATAAAGC AGCGACCTTT CACAAAATCT TGACGGCTAC CCTCGCCGAT
CCGCGGGTAT TGATTATCAA GCTGGCTGAC CGCTTGCACA ATATGTCAAC ACTAGATGCA
GTACGTCCTG AAAAACAACG TGCTACCGCG CAAGAGACAT TAGACTTTTA TGTGCCCTTT
GCACGGCTCA TGGGTCTTAA CGACATCGCT GATTATATTG AGGTGCTTTG TTATCGCAAC
CTTGATTCTG AAATGTATAA CAAGATCTCT GATAAACTGC TACAACATGG GCTCGGGCGC
AATTTTCAGA GAGAAGCCAT TCATCGCTAC TTAAGTATTG TTCTAAATAA TCTAGATCTT
GATGGCATGG TTAAAGTCTT AGACAATCGT GTTGTCATCT TTCGGCAATT TTTCCGTAAT
CGCGGCGAGA TTAATGCGCT ACTACGCCAT TATGCGTTTG AGATTGTGCT GGATAATATC
GAAGCTTGCG ACAAACTTGC CTACTATCTC ATTAAAAAAT ATCAAATTGC TGACAGTCAT
ATCGCGGATA ATATTCGCAG ACCCTTGCCT GGCGGCAATC AATCGCTTAC CCTTATCTAT
GAGCGCGACA ATGATTTTGT CAAAGTGACG ATTTTGACTA AGCAGATGCA AAGTGCGGCA
AGGCTTGGGG TCATCGGTGC AGAGCATGCC TCTGATGTCA GTCAATCAGT CATTCAGGCG
TCATTGCGCA ATATGAAAGA TTTGGTCGAT GAGGACTGTT TAAGCGAGGG CAACCCTGAC
TTTGCCACCG CGGTTTCGAC CATTAACGAG CTGATGGACT ATCTGCATTC CAGCAAAATT
ATCTGTTACA GCCCGCAAGG TCGTGCTTAT GAGTTACCAC AAGGAGCGAC TGCGCTAGAC
TTTGCTTATG CCGTTGGTCC GATGGTTGGC AATGTCGCTG TTGGTGCTAA TATCGATAAA
AAGCCTGCCA AGCTTGGGAC TGTAGTCAAA AATGGACAGT TGGTAGAAAT CGAGGTTAAT
AGCCATTCTG AGCCAAAAGC AGAATGGCTT GGGTTTGTGG TTACTAATAA AGCCCGTGTA
GAGATTTTGC GGTGGTTCAA AGACTTATCT GTGGCTGATA AGCAGCACCA TGGTAGACAA
GCACTAGATC GCGCGCTAAA AACTTATCAA AAAAGCTTGG ATGACCTAAC CGATAGTGAC
TGGAAGAATC TAACGGAATG GCGTGGACTG ACTGAGAAAT CAGCGCTATT TGAGCAAATA
AGCTCTGGTA CGCTATTGCC GCAACTCGTG GTGACGCGTT TGTTTAGCGA TGAAGTCTGT
GATATCCAAT CGCAAGAACG TATCGATGAT ATGACCCAAC CGCAGCAGCT GATTGTCAAT
GCTTCGGGCG TTGAGCTTGA TTTTGCCAAT TGTTGTCACC CGATTTATGG TGATCCTATC
GTTGGACATT TATCCCGTCA TGGTCTGGTC GTGCATCGAC ATAAGTGCTT TTCACTAGAC
GATATTCGTA AAGACAATCC CTATCAAGTC ATCCAATTAC GTTGGCACAA TGATAAAGCG
ATCAAGCAAA GTGACTCAGA AGATCACGGT AATAAAATTC GTTTTCCTGC TTATTTAAAA
CTGTCTATAG CAATGAGCGA TGAGCAAATC AGTAAAGTTA TTTATAATCT ACGGCAGTTA
AATATAGGGG TTGAAAAGGT CGACGTACGT GGCAGCGATA CCATCATTCA TATTGTGGTT
CGTAGCCGCA ATCACTTAGC CCAAGGTATT CGTGAACTAC GCTCGTTACT TGGTTTCCCC
AATATCATGC GTTTATATCA GCTGTAA
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| Protein sequence | MIQNLPKLSH PLVDDAQYNL LRSVGYLTGA ERRDIVDACE FGDVAHIKDK RKSGEPYITH
PIAVAEILAG FRLDRDTIIA AILHDTVEDT EVSDEQIETR YGKVVSRLVD GVTKLKSSTH
NKQENKAATF HKILTATLAD PRVLIIKLAD RLHNMSTLDA VRPEKQRATA QETLDFYVPF
ARLMGLNDIA DYIEVLCYRN LDSEMYNKIS DKLLQHGLGR NFQREAIHRY LSIVLNNLDL
DGMVKVLDNR VVIFRQFFRN RGEINALLRH YAFEIVLDNI EACDKLAYYL IKKYQIADSH
IADNIRRPLP GGNQSLTLIY ERDNDFVKVT ILTKQMQSAA RLGVIGAEHA SDVSQSVIQA
SLRNMKDLVD EDCLSEGNPD FATAVSTINE LMDYLHSSKI ICYSPQGRAY ELPQGATALD
FAYAVGPMVG NVAVGANIDK KPAKLGTVVK NGQLVEIEVN SHSEPKAEWL GFVVTNKARV
EILRWFKDLS VADKQHHGRQ ALDRALKTYQ KSLDDLTDSD WKNLTEWRGL TEKSALFEQI
SSGTLLPQLV VTRLFSDEVC DIQSQERIDD MTQPQQLIVN ASGVELDFAN CCHPIYGDPI
VGHLSRHGLV VHRHKCFSLD DIRKDNPYQV IQLRWHNDKA IKQSDSEDHG NKIRFPAYLK
LSIAMSDEQI SKVIYNLRQL NIGVEKVDVR GSDTIIHIVV RSRNHLAQGI RELRSLLGFP
NIMRLYQL
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