Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1722 |
Symbol | ispH |
ID | 3515690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2122039 |
End bp | 2122995 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637670418 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_265004 |
Protein GI | 71066277 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTT ATCTTGCCAA TCCACGTGGG TTTTGTGCTG GTGTGGATCG CGCGATTGCG ATTGTCAACG AAGCACTGTT ACGTTTTGAG CCACCCATCT ATGTCCGTCA TGAAGTGGTA CACAACAAGT TCGTGGTCTC CGATTTAGCC AATCGTGGCG CTGTGTTTGT CGAAGAATTG CATGAAGTAC CAGACGGCTC TATTGTTATT TTTTCAGCTC ACGGGGTTTC AAAAGCTGTC GAAGATGAAG CAGAGCGTCG TGATTTGACG GTATTTGATG CCACTTGTCC TTTAGTCACC AAAGTACATA TCGAAGTCGC TAAATTTGCG CAGGATGGTA TGGATGCGGT ATTGATTGGA CATGCGGGAC ATCCTGAAGT AGAAGGCACT ATGGGACGCT TTAACCATCG TCATGGCGGA CGGATTCATC TGGTCGAAAA CGAGAGCGAC GTTGAAGCCT TGAGCGTACA AGATGCCGAG CGTTTGGCAT TTGTGACTCA AACGACCTTA TCGATGGATG ATACTGCTCG TGTTATCGAT GCGCTGAGAG AAAAGTTCCC GCATATTCAA GGCCCGCGTA AAGACGATAT CTGTTATGCC ACCCAAAATC GTCAGGATGC GGTGAAGCAT TTAGCCAGTC GCTGTGAGGT GGTCTTGGTC GTTGGTTCAC CAAACTCATC AAACTCAAAT CGTTTGCGGG AATTGGCAGA GCGTATGAAT TGCCGCGCTT ATTTGATTGA TAATGCCACT GAAATGGATA TCAATTGGTT CGATGGTATA CAAAGCGTGG GTGTGACTGC TGGTGCTTCA GCGCCTGAGG TATTGATTCA AGAGGTACTA CAGCAGCTGC AAGATTGGGG TGGTGATTTG CCAAGTGAGC TGTCGGGTAT TGAAGAAAAT GTCACTTTTA GCTTACCAAA GGCCTTACGA ATTCCAATGA CGCAAGTGGG TAAATAA
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Protein sequence | MQIYLANPRG FCAGVDRAIA IVNEALLRFE PPIYVRHEVV HNKFVVSDLA NRGAVFVEEL HEVPDGSIVI FSAHGVSKAV EDEAERRDLT VFDATCPLVT KVHIEVAKFA QDGMDAVLIG HAGHPEVEGT MGRFNHRHGG RIHLVENESD VEALSVQDAE RLAFVTQTTL SMDDTARVID ALREKFPHIQ GPRKDDICYA TQNRQDAVKH LASRCEVVLV VGSPNSSNSN RLRELAERMN CRAYLIDNAT EMDINWFDGI QSVGVTAGAS APEVLIQEVL QQLQDWGGDL PSELSGIEEN VTFSLPKALR IPMTQVGK
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