Gene Psyc_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1708 
Symbol 
ID3515676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2110147 
End bp2110953 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID637670404 
Producthypothetical protein 
Protein accessionYP_264990 
Protein GI71066263 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.61279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTT TTATCTTGCA ACTTGCATTC TTACTTGCTG CGATGGCTTA CCTCTTAGTC 
AGCATCTATA TTGGTTGGGC GCTGATTCAG AATAAACCTA TCCATAAAGG CACTAGCTTA
GGCTTATTGT TTATGGGTAT GTTGGCACAT GCCGCCCTAC TTTATCCGCA CGTGGTCACC
CTCTATGGGC TAAATTTTAA TCTGTTTAAT ATCATCAGCC TGATCAGCTT GTTCTTTTTG
TTTTTCTACG TCATGTTCTC TCTATATCGA CCTATCGTCA GTCTGGGTAT TCTCGCCGCA
CCGACTGCAC TTACGGGTAT GATAATCGGC TATATTGGGC GGGCGCCTTA TCGTCCGATT
ACGGATATTA GCATTGGGCT TGAGGCTCAT ATCTTACTAT CACTTGCCGC GTATTGTGTG
CTGCTGATGG CAGCGGTACA AGCGTTGTTT TTACGCCTAC AGATACGCGA GCTTAAGCAT
CAATCGATTC ATCGCTTCTG GGTAAATAAG CTGCCGTCCC TTCAAAGCAT GGAGAGCCTG
TTATTTGATA TGCTATTGGT CGGCTTTGTC CTGCTCAGTA TCGCACTGGG GATTGGTTTT
ATCTACGTAG AAGACTTGAT GGCGCAGCAT CTTGTCCACA AAACAGCCTT TAGTCTACTG
TCATGGCTGC TGTTTGGCGC ATTACTCATC GGTAATTGGC GTGCTGGATG GCGCGGAAAA
CGTGCTGCCA ACATGACCAT TTATGCTTTT ATTTTATTAG CCATTGGTTT TGTCGGTAGC
AAGTTTGTGC TGGAGATGCT GCTGTAA
 
Protein sequence
MRFFILQLAF LLAAMAYLLV SIYIGWALIQ NKPIHKGTSL GLLFMGMLAH AALLYPHVVT 
LYGLNFNLFN IISLISLFFL FFYVMFSLYR PIVSLGILAA PTALTGMIIG YIGRAPYRPI
TDISIGLEAH ILLSLAAYCV LLMAAVQALF LRLQIRELKH QSIHRFWVNK LPSLQSMESL
LFDMLLVGFV LLSIALGIGF IYVEDLMAQH LVHKTAFSLL SWLLFGALLI GNWRAGWRGK
RAANMTIYAF ILLAIGFVGS KFVLEMLL