| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1655 |
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| Symbol | |
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| ID | 3515623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 2047966 |
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| End bp | 2049096 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670351 |
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| Product | rhomboid family protein |
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| Protein accession | YP_264937 |
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| Protein GI | 71066210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.51113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.445143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC AGCAGCTGTT TAAAACCGCA CCGGTCACTA CTTTACTATT AATCAGCTTT
ATCGGACTGT ATATCGTACA AGTGCTGACT GGTGTCGATG CCAATAATCC ATCGACTGAG
GCATTGATAA AATGGGGAGC TAATGCCCTG CCTTTTACCA TGGATAACGA ACCGTGGCGA
TTGGTCAGCA GTGCCTTTTT ACATATTGGC TTAATGCACT TATTGTTTAA TGGTTTTGCC
ATGTATTTCT TTGGGCAAAT CGCCGAGCCG ATGTTTGGCT CGCTTAAGTT TCTCACGCTG
TTTTTACTCG CGGCAATCGG CGGCAACTTA CTGAACAATT ACGTCACTTG GCAAGGTATT
GTGGATGGGA CGGGACAAGC CGGATTATCT GCAGGCGCAT CGGGCGGTAT TATGGGCATT
GGCGCGGCGT TATTAATCGC TGCGCTGTTT AAGATATCGG TTAATGGTAT GGTGCTCAAT
TTAAAAAGCC TAATATTTAT TATGGGCATC AACTTGGTCT ATGGTTTTGC GGTGCCGGGT
ATCGATAATG CGGGTCACAT TGGCGGTGCA ATTACGGGTC TTATCATTGC ACTGGCGTTT
GCTATTGCCC ATCGTCAGAG CATGGCAGCT GTCATTCAGA ATACTGCCAT TAATCAAATT
GACTATTTAC CCCATTATCA AAGTGAGCAG CAAAACGAAT ATCACAGCAC TTATATTAAT
ACGCCAGTGA ATAGCGATAC TCCCGTAAAT AGCGATACTC CCGTAAATAG CGATATTGGG
TTTACAAGTC AGCAGCATCA TACTGGTCAC GGCACTGATT TTGATAATAA GACTCACTTA
AATAGCACTC ACTTAAATCA TGACAGTTTG CATAATGAGA GTCATGTGGA TAATAATAGT
GGTGTAAACT CAAACGTAAC TATTAATCCT ATTAACCCCA TCAACCCTAT TCGCCCTACT
CTTAACGAAA CCCTGAATGA GAAAAGCACA GCCATTAAAC CTGCGCTTAT TTGGCAGTTG
CTGCCGTGGA TTGTGATGTT ATGTATTAGT ATTGGCTTTA TGTGGTGGTG GCAAGATATT
CATCAGCAAT TAATAGAAGT ACTAAATGCC ATCGAGCAAA GCACTATTTA G
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| Protein sequence | MTIQQLFKTA PVTTLLLISF IGLYIVQVLT GVDANNPSTE ALIKWGANAL PFTMDNEPWR
LVSSAFLHIG LMHLLFNGFA MYFFGQIAEP MFGSLKFLTL FLLAAIGGNL LNNYVTWQGI
VDGTGQAGLS AGASGGIMGI GAALLIAALF KISVNGMVLN LKSLIFIMGI NLVYGFAVPG
IDNAGHIGGA ITGLIIALAF AIAHRQSMAA VIQNTAINQI DYLPHYQSEQ QNEYHSTYIN
TPVNSDTPVN SDTPVNSDIG FTSQQHHTGH GTDFDNKTHL NSTHLNHDSL HNESHVDNNS
GVNSNVTINP INPINPIRPT LNETLNEKST AIKPALIWQL LPWIVMLCIS IGFMWWWQDI
HQQLIEVLNA IEQSTI
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