Gene Psyc_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1643 
Symbol 
ID3515611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2031762 
End bp2033966 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content45% 
IMG OID637670339 
Productmalate synthase G 
Protein accessionYP_264925 
Protein GI71066198 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0049939 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.83387e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCCAGT CTTCTAATGC CAATCGCGTT CAAAAAGGCA TTCTTGCCAT TGATCAGCAG 
CTGTTCGATT TTATCGAAAA TGAAGTGCTG CCGAAAGTCG GTATTGATTC AGACGGTTAT
TGGTCAGGTT TTGAAAAGGT CATTAAAGAG TTTACGCCAC GTAATAAAGC GCTGCTTGCA
ACCCGCGATA ATATTCAAGC GAAAATTGAC CAATGGCACC TGCAACACCC TGCCAAAAAT
GGCGATATTG ATTATCCAGT GTATAAGGCA TTTTTACAAG AAATTGGTTA TCTCTTACCA
GAAGGCGAAG CGTTCAGCGT CAGCACAGAA AACGTCGATG ATGAGATTGC ACTCATTGCA
GGACCGCAGT TGGTAGTGCC AGTACGTAAT GCTCGTTATG CTTTGAATGC CAATAATGCG
CGTTGGGGCA GCTTATATGA TGCTTTATAT GGCACCAATG TTATCAGTGA TGAAAATGGT
CAAGAAGCGA AAGGCGGTTA TAACCCAACA CGCGGCGCTG CGGTCGTCGC TTATGCCAAA
AATTTCTTAG ATGAAAACTT TACGCTAGCA TCAGGATCAT ATAGCGATGT AACTGGTTTT
AAAGTGGTCG ATGGCAAGCT TGAAATTGCT CAAGGTGATA GCAGCACGCA GCTGAAAAAT
GCCGCACAGT TTGCAGGTTT CGTTGGCGAT GCCAGCAGTC CTAGCGCTGT ATTAGTAAAG
AACAACAACT TGCATGCTGA GATTCAAATT GATAGCAATC ATCCCATTGG TAAAGATGAT
CCTGCCAATA TCAAGGACGT CTTATTAGAA TCAGCGCTGA CCGCGATTCA AGATTGTGAA
GACTCAATTG CTGCTGTCGA TGCCGAAGAA AAGGTTGAGG CTTATCGCAA CTGGTTTGGC
TTAATGAACG GCGATTTGCA AGAAACCTTT GAGAAAGGCG GTAAAACCCG CACCCGTAAA
CAAAATCCTG ATCGCAAATA TACCACGCCA GAGGGTGATA CGCTGACCTT GCCAGGTCGC
GCGCTCTTAT TGCTGCGTAA CGTCGGTCAT CTCATGCAAA ATCCATCGAT TTTGGTAGAT
TTGGGCAATG GGCAAGAAGA AGTTTTCGAA GGTTTGATGG ATGCTTTGAT TACGCCTTTA
TTATCATTAA ATGATTTGAA CGGTAAAACT GAGCTATCAA ACTCGCGTAA AGGCTCGATG
TATATCGTCA AACCAAAAAT GCATGGTCCA GACGAAGTGA AAATGGCGAA TGACTTATTT
AACGCCTCAG AAGATTTATT GGGCTTAGAG CGTCATACTA TAAAGATTGG CATCATGGAT
GAAGAGCGTC GTATGACGGT CAACTTAAAA GAAGCCATCC GCCAAGCAAA AGAGCGGGTT
ATTTTCATCA ATACTGGCTT TTTAGATCGT ACCGGTGATG AGATGCACAC CAGTATGAAT
GCAGGTCCAT TTGTCCGCAA AGACGATATG AAGTCGCAAA CGTGGCTACT AGCCTATGAG
CAGCGGAACG TCGATATCGG TCTGGAAGTA GGTCTACAAG GTCACGCTCA GATTGGTAAA
GGCATGTGGG CAAAACCTGA CGAGATGCAA GAGATGATGG ACACCAAGAT TGCCCATCCA
AAGTCAGGTG CCAATACTGC GTGGGTACCG TCACCAACGG GAGCGACCTT GCACAGCATG
CACTATCATC AAGTCAATGT CGCTGAGGTT CAAGACAGCC TAAAGTCACG TACGCGCGCA
AGCGTAGATG ATATCTTGAC CATTCCATTG GCAAAAAACA CCAATTGGAC TGAGAAAGAA
AAGCAGCAAG AGATTGATAA TAATGCTCAA GGCATCTTAG GCTATGTCGT ACGCTGGGTG
AACCAAGGCG TTGGTTGTTC CAAAGTCCCT GATATCAATG ATGTGGGCTT GATGGAAGAC
CGTGCGACGT TGCGTATCTC AAGTCAGCAT ATCGCCAATT GGTTACATCA TAATGTGGTC
AGCGAGCAGC AAGTGATGGA CGCTATGAAA CGTATGGCAA AAATCGTCGA TGAGCAAAAC
GCTGATGATG CTGATTATCA ACCGATGGCG ACTGACTTTG ACAATTCCTA TGCTTTCAAA
GCCGCCTGCG ATTTGGTGTT TAAAGGTCGC GAGCAGCCAA GTGGCTATAC TGAGCCGTTA
TTGCATCAAG CGCGTCTGGA CCTAAAAGCC AGCATCGGCT GCTAA
 
Protein sequence
MSQSSNANRV QKGILAIDQQ LFDFIENEVL PKVGIDSDGY WSGFEKVIKE FTPRNKALLA 
TRDNIQAKID QWHLQHPAKN GDIDYPVYKA FLQEIGYLLP EGEAFSVSTE NVDDEIALIA
GPQLVVPVRN ARYALNANNA RWGSLYDALY GTNVISDENG QEAKGGYNPT RGAAVVAYAK
NFLDENFTLA SGSYSDVTGF KVVDGKLEIA QGDSSTQLKN AAQFAGFVGD ASSPSAVLVK
NNNLHAEIQI DSNHPIGKDD PANIKDVLLE SALTAIQDCE DSIAAVDAEE KVEAYRNWFG
LMNGDLQETF EKGGKTRTRK QNPDRKYTTP EGDTLTLPGR ALLLLRNVGH LMQNPSILVD
LGNGQEEVFE GLMDALITPL LSLNDLNGKT ELSNSRKGSM YIVKPKMHGP DEVKMANDLF
NASEDLLGLE RHTIKIGIMD EERRMTVNLK EAIRQAKERV IFINTGFLDR TGDEMHTSMN
AGPFVRKDDM KSQTWLLAYE QRNVDIGLEV GLQGHAQIGK GMWAKPDEMQ EMMDTKIAHP
KSGANTAWVP SPTGATLHSM HYHQVNVAEV QDSLKSRTRA SVDDILTIPL AKNTNWTEKE
KQQEIDNNAQ GILGYVVRWV NQGVGCSKVP DINDVGLMED RATLRISSQH IANWLHHNVV
SEQQVMDAMK RMAKIVDEQN ADDADYQPMA TDFDNSYAFK AACDLVFKGR EQPSGYTEPL
LHQARLDLKA SIGC