Gene Psyc_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1642 
SymbolompN 
ID3515610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2030108 
End bp2031205 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content41% 
IMG OID637670338 
Productporin 
Protein accessionYP_264924 
Protein GI71066197 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.69717e-14 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.25637e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAAC TACTTTTAGC TACAGCAATC GCTGCCCTAT CTGTATCTGC AGCCAACGCA 
GCCCCAACTG TTTATGGTAA AGCTTTTGTT GCTATGAACT ACGTCAATGC TGAGGCTGAC
GCTGAGTATA ACTATTCAGA TATCAACGGT AATGTTGTTT ATAGTTACAG CGAAAACGTT
GACGAAAATA CAGTAGATAT CAACTCTCAT GCTTCACGTT TAGGCTTTAA AGGCTCTGAA
GCCATGACTG CTAATACTGA TGTTATCTAT CAATTAGAGT ATGGCATTGA TGTTTCTGGT
AACAACAGAA CTATCTCAAG CCGTGATATC TTCCTTGGTG TAAACAATAA GCAATTCGGT
GAGTTCCGTG CTGGTAGAAA CCAATCAACG CTAGCTCGTA TCGACAACGT TGTAGTGAAC
CAAGGTTACT TTGATAACTT AGGTAACAAC GATATGGAAA ACGACGTTGT TAAAGGCTTA
AACATGGCTG ACAGTGGTCG TATCAACAGT TCAGTCATTT GGACTGCCCC TAAGTATCAA
GGTCTACCAT TACAGTTCTC TGCAATGTAT AGCGCTGAAG ATCAAGAGGA AGGTAAAGAT
GATGGCTTTG GTGCTGCATT AATGTTTGAT CAAGGCACTG GCTTCACTGC TGGTGTTGCT
TATGACAAAG ATCAAAACAT CGAAGGTGAT ATCGTTCGTG GTACGGCGAC TGTCGATCTA
GCTAAATACA TGGCAGCTCC AGTAACACTA GGTGCGCTAT ATCAAGTAGC TGATTACGAC
TTTGCTGGCT CTAAAAAAGA GAAAGGCTTA GTTGTTAGCG CTGAAATGCC TTTAACTAAC
TTTGCTCGTC CAGCGTCTAT CTATACTCAG TACAATAAAA CTGATAACTT AGGCGGTTGG
GACAATGTTA ATTCAGATCA AATCGTTGTT GGTGGTAAAT ATATGTATAA AGACAACATC
ATTGCTCATG CCTATGCTGG TATGAATAAT GCTGATGCTG ATGGATCTAT GTCTTCTTCT
GAGCCTGGTT TTTTAGCCAC ATATCGCGCT GATGCTGAAG TATTCGTTAT CGGTACTGGT
CTAGAATACA AATTCTAA
 
Protein sequence
MKKLLLATAI AALSVSAANA APTVYGKAFV AMNYVNAEAD AEYNYSDING NVVYSYSENV 
DENTVDINSH ASRLGFKGSE AMTANTDVIY QLEYGIDVSG NNRTISSRDI FLGVNNKQFG
EFRAGRNQST LARIDNVVVN QGYFDNLGNN DMENDVVKGL NMADSGRINS SVIWTAPKYQ
GLPLQFSAMY SAEDQEEGKD DGFGAALMFD QGTGFTAGVA YDKDQNIEGD IVRGTATVDL
AKYMAAPVTL GALYQVADYD FAGSKKEKGL VVSAEMPLTN FARPASIYTQ YNKTDNLGGW
DNVNSDQIVV GGKYMYKDNI IAHAYAGMNN ADADGSMSSS EPGFLATYRA DAEVFVIGTG
LEYKF