Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1626 |
Symbol | |
ID | 3515593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2008784 |
End bp | 2009773 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670321 |
Product | LysR family transcriptional regulator |
Protein accession | YP_264908 |
Protein GI | 71066181 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.11884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC AGCGGGTTGA TTTAAATTTA TTGGTACATT TGGATGTGTT GTTGCGAGAA AAAAACGTAA CGCGCGCCGC TGAGCAGCTT GGCATTACCC AGCCTGCCAT GAGTAATATT TTGCGCCGCT TGCGTAAGCT ATTTAACGAC CCTCTATTGG TGCGCTCATC AGAAGGGATG ACACCGACCG AGCGCGCCCT TGAGCTACAG CCTCGTATCC GTGAGATACT TGCCGATTTG ACGCAAGTGT TAGAGCCACG TACCGAGTTT CGTCCTTATA GTACCTCACG TGTTTTTCGG ATTATGACCT CAGATTATGC TGAGGCGACC TTGGTTCCTA AGCTCGTAAA AGCGTTACGA TCAGAGGCAC CCAATGTCAT TTTAGATTTC TTAACGCCAT CGGACGTGTC ATATCGTGAT ATGGAGCAGG GGCGAGTAGA TTTGGCAATC AACCGCTTCA ATGAAATCCC ACAAAGCTTC CATCAAGTGT TGGTATGGCG TGATACCTTT AGCTGTTTAT TGGCAGCCGA AAGCCCTTAT GCCAATCGTT TTAATTTAAA AAACTATCTA AAAGCTCAGC ATGTTTGGGT GTCTAAAACC GGTATGGGCG TGGGCTTTGG TGTCAATCCA GAAAAATCTG GTGGACTCGG TTCTATTGAT CAGGCGCTAC AACGTCTAGG TCAAAAGCGC CAAATCAGTG TCTTTACCCG TCATTACCAA ATGCCAGCCA TGCTCGCAGC CAATAAAGAT TTGATTGCGA CCTTGCCGAC CCGTGTGGCA AAAATGCAGG CAAATAATGA CAGTATTATT ATGGAAGAGC CACCGTTTTT TATACCAGAA TTTGAGCTAA CGATGGCGTG GTCACCGTTA TTGCAGCATC ATCCGGCGCA TCGCTGGTTG CGTCAGCTGA TCATGCACGT AGCACGTCAA ATCGTTAACG ACGAAGAAAA TCCTCCACAA GAAATTCCTG TGATCAATCA TCTATTTTGA
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Protein sequence | MNLQRVDLNL LVHLDVLLRE KNVTRAAEQL GITQPAMSNI LRRLRKLFND PLLVRSSEGM TPTERALELQ PRIREILADL TQVLEPRTEF RPYSTSRVFR IMTSDYAEAT LVPKLVKALR SEAPNVILDF LTPSDVSYRD MEQGRVDLAI NRFNEIPQSF HQVLVWRDTF SCLLAAESPY ANRFNLKNYL KAQHVWVSKT GMGVGFGVNP EKSGGLGSID QALQRLGQKR QISVFTRHYQ MPAMLAANKD LIATLPTRVA KMQANNDSII MEEPPFFIPE FELTMAWSPL LQHHPAHRWL RQLIMHVARQ IVNDEENPPQ EIPVINHLF
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