Gene Psyc_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1587 
Symbol 
ID3515552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1941230 
End bp1943674 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content49% 
IMG OID637670280 
Productcopper/silver efflux P-type ATPase 
Protein accessionYP_264869 
Protein GI71066142 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.602341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTA ATAATAGCGA TAAAAAGAAT GGCCATAGTG GCCAAGAGTC AATGAATACT 
AATCAAACCC GTACTACCTT CAAAGAGTAT AACCAAGTGC CATCTGATTA TAATGGCACA
GTTTATACCT GTCCGATGCA TCCAGAGGTG AGAGATGTTG AAAAAAGCGA TTGCCCAATA
TGCGGTATGT TTCTCAAACC TGAGGGCGAG GTTGCTGATG AAGACAGTCA TTCACACTGT
CATGGAAAGG ATACTGACCG TACTAAGGTA AAATCTGTCA AAGGCGGCAA GTACGATAAG
GTGCCAGTTG GCTACAGCGG AACCGTTTAT ACCTGTCCTA TGCATCCCGA AGTCAGAGAT
GTTGAGAATA GTGGCTGTCC GATATGCGGA ATGGCACTTG AATCAGAGAC AGCTACCATT
GGTGAAGAAG ACACCTCAGA GCTCGACGAT ATGACACGCC GTTTCTGGAT ATGCACGGTG
CTCACCATAC CGCTATTTCT CTATGCAATG AGCGATATGG TAGGTATAAA TTTAGACAAT
CTTGGTCAGG GCAGTATCTC TGGGCAGATT GCGCAGTGGA TTCAGTTGGC GCTTGCGACA
CCAGTAGTGC TATGGGGAGC AGCGCCTTTC TTCGTCCGTG GCTGGCAATC CATAAAAAGT
CGCAACCTGA ACATGTTTAC TCTGATTGCA GTTGGCGTAG GCGCAGCTTT TGGTTTCAGT
CTAGTAGCAA CCTTCCTTCC GGATATTTTC CCAGACAGCT TCAGGGACGC CACTGGCCAA
GTTGGGGTGT ACTATGAAGC AGCAGCTGTC ATCGTGACCT TGGTGTTATT GGGTCAGGTG
TTAGAACTAA AAGCCAGAAG TCAGACCTCA GGAGCAATTC GTGCTCTACT CGAGCTGGCA
CCACCAACGG CAAGACGTGT GGATGAAAAC GATGTCGAGA CCGAAGTATC ACTTGACGAA
GTTATCAGCG GCGACAGATT GCGAGTCAAG CCAGGAGAGA AGCTTCCGGT AGACGGCACG
GTACTTGATG GTAGTAGTAG TATCGATGAA TCGATGGTGA CTGGCGAACC AATTCCGGTC
TTAAAGGCAC AAGGGGATAC GGTCACTGGC GGCACGGTGA ACGGTACGGG GACCCTATTG
ATTGAAGCGG TTGATGTCGG TGAAGATACG GTATTGTCCA AGATCGTCAA GATGGTTGCC
GAAGCTCAGC GCAGTCGAGC GCCGATACAG CGACTGGCAG ATAAGGTGGC TGGGTGGTTC
GTTCCAATCG TTATGCTCTG TTCTGTTGTG ACTTTTATTG TCTGGGCTAT GTTCGGGCCT
GTGCCTGCGA TGGCCTATGC ACTGGTCAAT GCTATCGCTG TATTAATCAT AGCTTGCCCG
TGTGCGTTAG GATTGGCTAC GCCAATGTCG ATTATGGTTG GTACCGGAAA GGGTGCACAG
CATGGGGTAC TCATCAAGAA TGCTGAAGCG TTAGAGAGCA TGGAAAAAGT TGATACCATC
GTTGTAGATA AGACAGGAAC GCTGACAGCA GGCAAACCGG AACTCACTGC TATCGAAGCG
CTTGGCAGTA TAGATGAGGA TGAACTCTTT GTGCTTGTCG CAGCGGTAGA GAGTGCCAGC
GAGCATCCTT TGGCAGAAGC TATTGTCAAG GCTGCGAAGG AAAAATCTCT CGATATTGCT
AAAGCCAGCG ATTTCAGTTC AACCACTGGT GAAGGCGCTC AGGCACTGGT TAATGGCAAG
CAGGTCGCCG TCGGCAACTC AAAATTCATG CAGCGACTTG ACAGTTTTGA TAGCTCGCTT
TCAGAACGCG CCGACAAACG CAGGAAGGAC GGTGAAACCG TCATGTTCGT CGCAGTAGAT
GGGCGAGCCG CTGGTCTAAT CTCAGTTGCT GATCCAATCA AGCCGAGTAC AAGTGAAGCC
ATATCACTAC TGCACAAAGC TGGTCTGCGG GTGGTCATGC TGACAGGTGA CAACGAAATA
ACGGCCAGAG CCGTTGCTAG TAAGCTGAAT ATTGACGAAG TGCATGCAGA TGTCTCTCCA
GAAGACAAGA ACCGTATTAT TAAAGAATTA CAAAGTAGCG GTCAGATCGT AGCCATGGCG
GGTGACGGTA TCAACGATGC GCCCGCTCTT GCACAGGCCA ATGTCGGCAT CGCCATGGGA
ACTGGCACAG ATGTAGCCAT GGAGAGTGCT GGCATCACGC TATTGAAGGG TGATTTGATG
GGCATTGTCA GAGCCCATAA ACTGAGCCGT TCCACGATGC GTAACATCAA GCAGAATCTG
TTTTTTGCTT TTATATATAA CGCACTCGGC ATACCGCTGG CTGCTGGTGT CCTGTATCCA
GTTTTTGGGC TTTTACTCAG TCCAATGATA GCGGCAGCTG CGATGAGCTT TTCTTCGGTA
TCGGTTATTG GTAATGCGCT GAGACTGCGC CGTTTGAAAC TGTAA
 
Protein sequence
MNPNNSDKKN GHSGQESMNT NQTRTTFKEY NQVPSDYNGT VYTCPMHPEV RDVEKSDCPI 
CGMFLKPEGE VADEDSHSHC HGKDTDRTKV KSVKGGKYDK VPVGYSGTVY TCPMHPEVRD
VENSGCPICG MALESETATI GEEDTSELDD MTRRFWICTV LTIPLFLYAM SDMVGINLDN
LGQGSISGQI AQWIQLALAT PVVLWGAAPF FVRGWQSIKS RNLNMFTLIA VGVGAAFGFS
LVATFLPDIF PDSFRDATGQ VGVYYEAAAV IVTLVLLGQV LELKARSQTS GAIRALLELA
PPTARRVDEN DVETEVSLDE VISGDRLRVK PGEKLPVDGT VLDGSSSIDE SMVTGEPIPV
LKAQGDTVTG GTVNGTGTLL IEAVDVGEDT VLSKIVKMVA EAQRSRAPIQ RLADKVAGWF
VPIVMLCSVV TFIVWAMFGP VPAMAYALVN AIAVLIIACP CALGLATPMS IMVGTGKGAQ
HGVLIKNAEA LESMEKVDTI VVDKTGTLTA GKPELTAIEA LGSIDEDELF VLVAAVESAS
EHPLAEAIVK AAKEKSLDIA KASDFSSTTG EGAQALVNGK QVAVGNSKFM QRLDSFDSSL
SERADKRRKD GETVMFVAVD GRAAGLISVA DPIKPSTSEA ISLLHKAGLR VVMLTGDNEI
TARAVASKLN IDEVHADVSP EDKNRIIKEL QSSGQIVAMA GDGINDAPAL AQANVGIAMG
TGTDVAMESA GITLLKGDLM GIVRAHKLSR STMRNIKQNL FFAFIYNALG IPLAAGVLYP
VFGLLLSPMI AAAAMSFSSV SVIGNALRLR RLKL