| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1530 |
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| Symbol | |
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| ID | 3515491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1871791 |
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| End bp | 1873164 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670219 |
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| Product | peptidase RseP |
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| Protein accession | YP_264812 |
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| Protein GI | 71066085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00980857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTTTC TATTAACGCT CCTTGCGGCA ATATTTGTCT TAGGTCCGCT TATTGCTCTG
CATGAATGGG GTCACTATAT TGTGGCGCGA CTTTGCGGCG TTAAAGTGCT CACGTATTCT
ATCGGTTTTG GTCCCAAACT CTTTGGCTGG ACCAGCAAAA AAAGCGGCAT TGATTATCGT
ATTTCAGCCT TACCACTCGG TGGCTACGTC AAGATGCTCG ATGAGCGTGA AGGTGAGGTG
GCAAAAGAAG AGCAGCATTT AGCATTTAAT CGTCAGCATC CGCTTAAGAA AATAGCCATT
GTCGCCGCCG GTCCTATCAT GAACTTTGTC ATTGCGATTG TATTGTTCTG GGTGTTATTT
ATGACCCCAT CAGAACAGCT CGCCACCAAG ATTGGTCAAG TGTTACCGGA TACCCCAGCA
GCGATGGCGC AGCTGCCGGT TGGTGATAAA ATCGTTGCGA TTGATGGTCA TGACGTGCAG
ACGTGGGAAG GGATTAACTA TCGCCTTGCT GGGCGCATGG GTGAGACAAC CAATATAAGT
GTTACCTTGC AATCAGAAGT AGACAAGGGT GCAACCAAGA CCTACCAAGC ACCTATTAAA
GAGTTTATGC AAGGCGCGGC GCAAGGCAAA GATGCGCTAT CAAGCTTTGG TATGATACCG
TGGCAACCGA ATATTGCACC GATAGTCGGC GATTTAACGC CTGATGGCGC GGCCAGTCGT
CAAGGTCTAA AAGTTAGTGA CCGTATCACT GCTATTAATG ATGAAGCAAT TAACGACTGG
ATCAGCGCCA CTCGTATTAT TCGCGATAAT CCTGAGACTT TGCTGACATT TAGCGTATTG
CGTGATGATA AGCCGATTGA ATTACAGATT ATGCCGCAAG GTAAAAAAGA CAATTTAGGT
AACGATTATG GACAAATTGG TGCTATGGTG GCACAGTCTG AGATTATTAT TCCTGATGAA
TACAAAACCA CTGTGGTCTA TGGTCCTGGT GAGTCGTTGA TAAAGTCGTT TGAAAAGACG
GAACAATTGG CTGTCATGAC TGTCAGCTCA ATGGGCAAGA TGCTATCAGG TATGATTGGT
CTTGATAATT TATCAGGTCC GATTACCATT GCAAAAGTTG CCAAGCAAAG CTTTGATATC
AGTTGGCAAA TGGTGTTGTC TACCGCGGCT TTAATCAGTT TGAGCCTTGC TGTCCTGAAT
CTGTTGCCCA TTCCGGTATT AGATGGCGGT CATATTGTCT ATTATCTGAT CGAGCTGATA
CGCGGTAAGC CACTCTCTGA AGGCGTGCAA ATGGTGGGCT TAAATATCGG CTTACTCTTG
CTGGCAGGTT TCATGGTGTT AGCAATTGGT AATGATATCA GTCGGCTTTT TTGA
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| Protein sequence | MTFLLTLLAA IFVLGPLIAL HEWGHYIVAR LCGVKVLTYS IGFGPKLFGW TSKKSGIDYR
ISALPLGGYV KMLDEREGEV AKEEQHLAFN RQHPLKKIAI VAAGPIMNFV IAIVLFWVLF
MTPSEQLATK IGQVLPDTPA AMAQLPVGDK IVAIDGHDVQ TWEGINYRLA GRMGETTNIS
VTLQSEVDKG ATKTYQAPIK EFMQGAAQGK DALSSFGMIP WQPNIAPIVG DLTPDGAASR
QGLKVSDRIT AINDEAINDW ISATRIIRDN PETLLTFSVL RDDKPIELQI MPQGKKDNLG
NDYGQIGAMV AQSEIIIPDE YKTTVVYGPG ESLIKSFEKT EQLAVMTVSS MGKMLSGMIG
LDNLSGPITI AKVAKQSFDI SWQMVLSTAA LISLSLAVLN LLPIPVLDGG HIVYYLIELI
RGKPLSEGVQ MVGLNIGLLL LAGFMVLAIG NDISRLF
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