Gene Psyc_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1468 
SymbolmrcB 
ID3515429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1783417 
End bp1785900 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content45% 
IMG OID637670157 
Productpenicillin-binding protein transpeptidase domain-containing protein 
Protein accessionYP_264750 
Protein GI71066023 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family
[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.614381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.4056e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCAAAAAT CTCATTCTAA GCAACCACAG TCCTCTAAGC CTGCTATCAA TACGCTACCT 
TCCCAGCAGC GCGGCATGGT GTTTAGTAGT ATTTTATTAA TTATTGTCAT CGCTGGCATG
GTGCTATTGG CACTGTATTT GGTCAAACTT GATCGTACTA TTACCCACAA GTTTGAGGGT
AAACGCTGGG ATATTCCTGC CAAAGTTTAT TCGCAGCCGC TTGAATTGTA TAAAGGCGCC
AATATCGATA AAGACACTAT GAAGACGTGG TTTGAGTTGC TCAATTATCA AAGCGATAAA
GCCTATGATC GCACCGGCAC TTATCATAAA TCGGGTAACA CCTATTTTAT TCATACACGT
GGTTTTACTT ATAGCGCCAA CGATATAGAC CAAGAACAAG TCATCAAAAT GACCATTGCT
GGTAATAAAA TTGAGTCGGT ACAAAGCACC ATACCGGCGA AAACAGGCAT TATTCGTCTT
GAGCCGGTCA ATATCGGCGG TATTTACCCT GATAGCAATG AAGACCGCAT GGTTGTCTCG
TTAGATCAAG TACCGCAGCC GCTTATTGAT GCGCTGATAG CGACAGAAGA TCGTGGTTTT
TATGAGCATA AAGGGGTATC GATACGCGGT ATCGCCCGTG CGGTCATCAA TAACTTCTCT
GGCGGTTCGC GCCAAGGTGG CTCGACCATC ACCCAGCAGC TGATCAAAAA CTTTTATCTC
AATTCCGACC GTACGATGAA GCGCAAAGCC AATGAAGCCT TGATGGCTGT ACTACTTGAG
CTGCATTATA GTAAAGATGA GATTTTGCAG GCCTATCTCA ACGAGATTTA TTTGGGTCAA
AACGGCAAAC GCTCTATTAA TGGTTTTGGG TTGGCATCAC AGTTTTATTT TGATAAGCCG
CTCAATGAGC TGCGCCTAGA TCAGCAAGCA CTGCTTGTCG GTATGGCAAA AGGACCGAGC
GTTTATAACC CGCGTCGTCA TCCAAACGAT TCAAAAGCAC GCCGTGATGT GGTGCTTAGT
AATATGTTGG CTGTTGGCAC GCTCAGTCAA GAAGACTATG ATACAGCATT AAAAAACTCA
CTTGGGGTGG TTGATAAGCC TGTTGAAGGC AAAAGCCAAT TCCCTGATTT TTTAGACATC
GTCAAACGCG AATTAAATAA AGTTTATTAC TCTGATGACC TCAAAAACGA AGGTCTGATT
ATCATCAGTA CCATGGACCC TATTGCCCAG TTGGCAGCGG ACAAAGCAGT TGAGAGAAAA
CTTGGCGAGC TACGCCGTAG TGGCAGTAAA ACCAAGGACT TACAAGGGGC TCTAGTCAGT
GCTAACCCTG AAACTGGTGA GCTGGTTTCT GTCGTGGGTA GCGGTAGCGA ATTTACTGGC
TTTAACCGTG CGGTCGATGC CAAACGCCAA GTAGGTTCAT TATTGAAGCC GATTATTTAT
ATGACCGCTC TCGAAAGTGG TCGCTATAAT TTAGCAAGTT CGGTTGATGA TTCTCCCATT
ACGGTCAGTC TAAGTGACGG TACCGAGTGG AATCCTAAAA ACTATGACAA TCGTGACCAT
GGCTACATCC CCTTTACCAC GGCGCTATCG CAGTCTTATA ACCATAGCGC TGTACGCTTA
GGGATGGAGT TTGGGGTCGA CACCTTTGCT AAACAATTAA AACGCATGGG TGTTAAAGAA
AAAGTACCAC CTTATCCTTC AGCATTATTG GGCTCAGTCA ACCTAAGCCC AATGGATATG
CTTGGGGTCT ATCAAGTTTT TGCGACGGGC GGTTTCCGTA CCCCTATCCA CAGTATCCGT
AGTGTGATTG ATGATCGCGG TAGTATCCTA CAGCGTACGG GATTAAATAC TCAGCGCAGC
ATTCCGCCTG AGACCAACTT TTTGATTAAC TATGCTTTAC AAGACGTCGT TAAAAACGGT
ACGGCTAGAC GCGTACAATC GCTTGGTAGC AATCTAAACC TTGCCGGCAA AACAGGTACT
ACCAATGATT ACCGTGATGC GTGGTTTGCC GGTTATAGTG GCAACTATGT CAGTGTGGTT
TGGGTTGGAC GTGATGACAA TAAACCTATT GGGCTTAGTG GCGGTAGCGG CGCTTTACCA
GTTTGGGTCG ATTATATGAA TCGTCTAAAA TTGACACCTG TTGCGCTGCC TGAGCCAGAA
GGTATTGAAT GGCTGTGGTT AGAGAACAAC TCAGGTAAGC TGTCAAATGA GCGCTGTGCC
AGCGCACGCT ACTTGCCTGT AATGTCAGCA TATTTACCAC AAGAAGCCAG CAGCTGTGCT
ATCGGCTTAT ATCAACAAGA ACGTATGCGT GAGCAAATGC AGTGGCAAAA TCAGCAAGGC
AATATCAATA AGCAACGTCG CCATGAAGGA TTAGACATTC CAAATGGTGA AGCCATTAAT
AATGACAGCA ATGATGCCGA GCAAGATGGG GATACATCCA ATCGTGCAGA TACTTGGTAC
GACCGTGCCG TTGAATGGTT TTAG
 
Protein sequence
MQKSHSKQPQ SSKPAINTLP SQQRGMVFSS ILLIIVIAGM VLLALYLVKL DRTITHKFEG 
KRWDIPAKVY SQPLELYKGA NIDKDTMKTW FELLNYQSDK AYDRTGTYHK SGNTYFIHTR
GFTYSANDID QEQVIKMTIA GNKIESVQST IPAKTGIIRL EPVNIGGIYP DSNEDRMVVS
LDQVPQPLID ALIATEDRGF YEHKGVSIRG IARAVINNFS GGSRQGGSTI TQQLIKNFYL
NSDRTMKRKA NEALMAVLLE LHYSKDEILQ AYLNEIYLGQ NGKRSINGFG LASQFYFDKP
LNELRLDQQA LLVGMAKGPS VYNPRRHPND SKARRDVVLS NMLAVGTLSQ EDYDTALKNS
LGVVDKPVEG KSQFPDFLDI VKRELNKVYY SDDLKNEGLI IISTMDPIAQ LAADKAVERK
LGELRRSGSK TKDLQGALVS ANPETGELVS VVGSGSEFTG FNRAVDAKRQ VGSLLKPIIY
MTALESGRYN LASSVDDSPI TVSLSDGTEW NPKNYDNRDH GYIPFTTALS QSYNHSAVRL
GMEFGVDTFA KQLKRMGVKE KVPPYPSALL GSVNLSPMDM LGVYQVFATG GFRTPIHSIR
SVIDDRGSIL QRTGLNTQRS IPPETNFLIN YALQDVVKNG TARRVQSLGS NLNLAGKTGT
TNDYRDAWFA GYSGNYVSVV WVGRDDNKPI GLSGGSGALP VWVDYMNRLK LTPVALPEPE
GIEWLWLENN SGKLSNERCA SARYLPVMSA YLPQEASSCA IGLYQQERMR EQMQWQNQQG
NINKQRRHEG LDIPNGEAIN NDSNDAEQDG DTSNRADTWY DRAVEWF