Gene Psyc_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1462 
SymbolcsrA 
ID3515423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1776935 
End bp1777180 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content47% 
IMG OID637670151 
Productcarbon storage regulator 
Protein accessionYP_264744 
Protein GI71066017 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000365712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000230945 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAATTT TGACACGCCG CGTGGGCGAA ACGCTAATGA TTGGCGACGA GGTCAGTGTG 
ACTGTCCTAG GTGTAAAAGG CAATCAAGTA CGTATCGGCG TTGATGCGCC AAAAGATATT
GCCGTACACC GCGAAGAGAT TTATCAGCGC ATCCAACATG AGCGCACGAT ACAGTCGCAA
ATGCAGCATC TTGAGCAAGG TAGCTTTGCG CCTTCATTTG ATGACGAAGA CTATTTTAAT
CGCTAA
 
Protein sequence
MLILTRRVGE TLMIGDEVSV TVLGVKGNQV RIGVDAPKDI AVHREEIYQR IQHERTIQSQ 
MQHLEQGSFA PSFDDEDYFN R