Gene Psyc_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1461 
SymbollysC 
ID3515422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1775245 
End bp1776531 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID637670150 
Productaspartate kinase 
Protein accessionYP_264743 
Protein GI71066016 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase
[TIGR00656] aspartate kinase, monofunctional class 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.57046e-13 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.74387e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTTAA TAGTACAAAA ATACGGCGGC ACCTCGATGG GCAGTATCGA CCGCATCAAA 
AACGTCGCCA AACGAGTCAA ACGCTGGCAT GACAACGGTC ATCAAGTGGT CGTTGTTGTG
TCTGCCATGA GCGGTGAAAC CAACCGTTTG ATTGATTTAG CACGCCAAAT CAGCAGCCAG
CCTGACCCTC GCGAATATGA CCAAATGGTT TCAACGGGTG AGCAAGTTTC TATATCTTTG
CTTGCCATGG CGATTAAAGA GTTAGGTATC GGCGCACGTT CATTTACCGG TCGTCAAGTG
GCCATTAAAA CCGATAACGC CCACAATAAA GCGCGTATCG AAAGTATCGA TGACAAAAAC
ATCCGTCAGC AGCTAGATGC AGGCAACATC GTTATCGTCG CAGGTTTCCA AGGTATCGAT
GAAGAAGGCA ATGCGACGAC CTTAGGTCGT GGCGGCTCCG ATACGACAGG TGTAGCGATT
GCCGCGGCTT TAGGCGCTGA CGAATGCCAA ATCTATACCG ATGTCGATGG CGTCTATACC
ACTGACCCTC GCGTCACCTC AAAAGCCAAA AAACTTGAAA AGATTACCTT TGAAGAAATG
CTTGAGATGG CAAGTCTTGG CTCTAAGATT TTACAGATTC GCTCAGTAGA ATTCGCTGGC
AAATACGGCG TACCGCTGCG CGTATTATCT AGCTTTGATG AAAACAACGA TGGTAGCTTT
GACCAAGACT TTCAAGACAA TGTCGGCACC CTAATTACGA TAGACGAAGG AGATAATATG
GAACAGGCAA TCATTTCAGG TATCGCTTTT AATCGAGACG AAGCAAAAAT CGTCGTACGT
GGTGTACCTG ATCACCCTGG TATCGCCTCT GCTATCCTCA GCCCTATTGG CCGCGCGAAT
ATCGAAATTG ACATGATAGT GCAAAACCTA TCAACCAACG GCATGACCGA TTTTACCTTT
ACCGTCAATC GTACTGACAT GGAAAAAACC ATGAAAGTAC TAGAAAACGA AGTCAAAGAT
GAAATCGGTG CCAAAGAGAT ATTGGCCAAT GATGAAGTCG TTAAAGTCTC ATTAGTCGGC
GTCGGTATGC GCTCTCACGC GGGTGTTGCT AGCCTCATGT TTCAAACCCT TGCCGAAAAC
AACATCAATA TTCAAATGAT ATCAACCAGT GAAATCAAGG TATCTGTTCT TATCCAAGAG
CAGTATCTAG AAAAAGCCGT GAGATCTCTC CATACCGCCT TTGGACTAGA TCGTGAAGAC
GGTGAAAGCA AAGTCGCTGG TTTATAA
 
Protein sequence
MALIVQKYGG TSMGSIDRIK NVAKRVKRWH DNGHQVVVVV SAMSGETNRL IDLARQISSQ 
PDPREYDQMV STGEQVSISL LAMAIKELGI GARSFTGRQV AIKTDNAHNK ARIESIDDKN
IRQQLDAGNI VIVAGFQGID EEGNATTLGR GGSDTTGVAI AAALGADECQ IYTDVDGVYT
TDPRVTSKAK KLEKITFEEM LEMASLGSKI LQIRSVEFAG KYGVPLRVLS SFDENNDGSF
DQDFQDNVGT LITIDEGDNM EQAIISGIAF NRDEAKIVVR GVPDHPGIAS AILSPIGRAN
IEIDMIVQNL STNGMTDFTF TVNRTDMEKT MKVLENEVKD EIGAKEILAN DEVVKVSLVG
VGMRSHAGVA SLMFQTLAEN NINIQMISTS EIKVSVLIQE QYLEKAVRSL HTAFGLDRED
GESKVAGL