Gene Psyc_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1394 
Symbol 
ID3515352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1686635 
End bp1687189 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID637670081 
Producthypothetical protein 
Protein accessionYP_264676 
Protein GI71065949 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00257534 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.766681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TTACCCTATA TGATAAAACC ACTGCCCCAG AAGCTAGCCA AGCGTCACTA 
GACAATTCGA TTAAAGCTTT TGGCAGTATT CCAAACCTAC ATGCAACAAT GTCTGAAGCG
CCAGGGCTGC TAGAGGGCTA TCAGCGTTTG CATCAGCTGT TCTTAGACAG TAGTTTTGAT
GCTGAAGAGA CCACGGTAGT GTGGCAAACG ATCAATGTGG AGCACGAGTG CCATTACTGC
GTTCCGGCTC ATACAGGCAT TGCTAAAAGC ATGAACGTTG ATGACTCCAT CACCGATGCC
CTGCGTAATG AAACCTCACT ACCAACTGCA AAGCTAGAAG CGCTACGTAC TTTTACCCTC
GCTGTTGTTC GCAATCGTGG TAACGTTGAT GATGAGAGTG TGCAAGATTT TCTAGATGCT
GGTTTTAGCA AACGTCAGAT ACTAGAAGTG GTGTTGGGTA CCGCTCAAAA GATAATGAGT
AATTACACCA ACCATTTGGC GAAGACGCCT ATAGATAAGC CATTTGAAAA ATTTGCATGG
CAAAAAACGG ACTAA
 
Protein sequence
MTEFTLYDKT TAPEASQASL DNSIKAFGSI PNLHATMSEA PGLLEGYQRL HQLFLDSSFD 
AEETTVVWQT INVEHECHYC VPAHTGIAKS MNVDDSITDA LRNETSLPTA KLEALRTFTL
AVVRNRGNVD DESVQDFLDA GFSKRQILEV VLGTAQKIMS NYTNHLAKTP IDKPFEKFAW
QKTD